RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 POF1BQ8WVV4 589 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 P2RX5Q93086 422 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 ATP6V0A4Q9HBG4 840 aa16.48■□□□□ 0.23
ATG4B-223ENST00000493618 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-223ENST00000493618 NCOR1O75376 2440 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 CCNT1O60563 726 aaKnown RBP16.47■□□□□ 0.23
ATG4B-223ENST00000493618 ANAPC15P60006 121 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 XKR3Q5GH77 459 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 EARS2Q5JPH6 523 aaKnown RBP16.47■□□□□ 0.23
ATG4B-223ENST00000493618 PLA2G4FQ68DD2 849 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 NEK8Q86SG6 692 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 FAM177A1Q8N128 213 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-223ENST00000493618 RNF169Q8NCN4 708 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 NIFKQ9BYG3 293 aaKnown RBP16.47■□□□□ 0.23
ATG4B-223ENST00000493618 TYW1Q9NV66 732 aaKnown RBP16.47■□□□□ 0.23
ATG4B-223ENST00000493618 TMEM161AQ9NX61 479 aa16.47■□□□□ 0.23
ATG4B-223ENST00000493618 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-223ENST00000493618 XBP1P17861 261 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 EIF4BP23588 611 aaKnown RBP16.46■□□□□ 0.23
ATG4B-223ENST00000493618 SSTR3P32745 418 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-223ENST00000493618 FAM189BP81408 668 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 ME3Q16798 604 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 RBM23Q86U06 439 aaKnown RBP16.46■□□□□ 0.23
ATG4B-223ENST00000493618 COLGALT1Q8NBJ5 622 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 CEP89Q96ST8 783 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 CWH43Q9H720 699 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 VAV3Q9UKW4 847 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 PCDHB12Q9Y5F1 795 aa16.46■□□□□ 0.23
ATG4B-223ENST00000493618 TBX10O75333 385 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 SEC24BO95487 1268 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
ATG4B-223ENST00000493618 DARSP14868 501 aaKnown RBP16.45■□□□□ 0.22
ATG4B-223ENST00000493618 PSMC5P62195 406 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 NR5A1Q13285 461 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 ANKRD1Q15327 319 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
ATG4B-223ENST00000493618 ANO5Q75V66 913 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 ECHDC2Q86YB7 292 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 KSR1Q8IVT5 923 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 THNSL1Q8IYQ7 743 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 GJD3Q8N144 294 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 KCNMB3Q9NPA1 279 aa16.45■□□□□ 0.22
ATG4B-223ENST00000493618 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-223ENST00000493618 A0A087WZ62 844 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 MARCH6O60337 910 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 FGF18O76093 207 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 KRT2P35908 639 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 NRIP1P48552 1158 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 NPEPPSP55786 919 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 PPP2R5CQ13362 524 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 NCAPH2Q6IBW4 605 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 LRRC55Q6ZSA7 311 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 RHPN2Q8IUC4 686 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 ZNF579Q8NAF0 562 aaKnown RBP16.44■□□□□ 0.22
ATG4B-223ENST00000493618 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 HAS1Q92839 578 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 CASD1Q96PB1 797 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 FDXACB1Q9BRP7 624 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-223ENST00000493618 ELAC1Q9H777 363 aaKnown RBP16.44■□□□□ 0.22
ATG4B-223ENST00000493618 AAASQ9NRG9 546 aa16.44■□□□□ 0.22
ATG4B-223ENST00000493618 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-223ENST00000493618 SUCLA2Q9P2R7 463 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-223ENST00000493618 WRAP73Q9P2S5 460 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-223ENST00000493618 IGKV6-21A0A0C4DH24 114 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 NCK2O43639 380 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 JAK2O60674 1132 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 MAFO75444 373 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-223ENST00000493618 PBX3P40426 434 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 NDUFV1P49821 464 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 DNM2P50570 870 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 NEK4P51957 841 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 ADAM15Q13444 863 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 LONRF3Q496Y0 759 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 CLLU1OSQ5K130 101 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 PPP4R3AQ6IN85 833 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 WASF1Q92558 559 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 FAM20AQ96MK3 541 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 C1QTNF1Q9BXJ1 281 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 GCOM2Q9BZD3 368 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-223ENST00000493618 TMEM117Q9H0C3 514 aa16.43■□□□□ 0.22
ATG4B-223ENST00000493618 PER2O15055 1255 aa16.42■□□□□ 0.22
ATG4B-223ENST00000493618 MBTPS2O43462 519 aa16.42■□□□□ 0.22
ATG4B-223ENST00000493618 GCFC2P16383 781 aaKnown RBP16.42■□□□□ 0.22
ATG4B-223ENST00000493618 QARSP47897 775 aaKnown RBP16.42■□□□□ 0.22
ATG4B-223ENST00000493618 ERVFC1P60507 584 aa16.42■□□□□ 0.22
ATG4B-223ENST00000493618 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-223ENST00000493618 ABI1Q8IZP0 508 aa16.42■□□□□ 0.22
ATG4B-223ENST00000493618 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
ATG4B-223ENST00000493618 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
ATG4B-223ENST00000493618 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms