RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 EXOC8Q8IYI6 725 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 C7orf61Q8IZ16 206 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 TCP11Q8WWU5 503 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 DHX38Q92620 1227 aaKnown RBP17.47■□□□□ 0.39
HPS4-216ENST00000493455 ERCC4Q92889 916 aaPredicted RBP17.47■□□□□ 0.39
HPS4-216ENST00000493455 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 LRRC27Q9C0I9 530 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 PCDH10Q9P2E7 1040 aa17.47■□□□□ 0.39
HPS4-216ENST00000493455 SMIM35A0A1B0GVV1 85 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
HPS4-216ENST00000493455 PNOCQ13519 176 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 CUL4BQ13620 913 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 TAF2Q6P1X5 1199 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 KSR1Q8IVT5 923 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 PSPC1Q8WXF1 523 aaKnown RBP17.46■□□□□ 0.39
HPS4-216ENST00000493455 NLRP4Q96MN2 994 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 HTATIP2Q9BUP3 242 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 TMEM39AQ9NV64 488 aa17.46■□□□□ 0.39
HPS4-216ENST00000493455 IGKV6-21A0A0C4DH24 114 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 M0QZ92 97 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 MBD3O95983 291 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 CD4P01730 458 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 CLTBP09497 229 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 SRGAP2CP0DJJ0 459 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 FAAP100Q0VG06 881 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 GIT2Q14161 759 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 NFKBIBQ15653 356 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 C1orf53Q5VUE5 145 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 IER5Q5VY09 327 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 KANK3Q6NY19 840 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 KIAA0319LQ8IZA0 1049 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 MYCT1Q8N699 235 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 CCDC155Q8N6L0 562 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 PRPF31Q8WWY3 499 aaKnown RBP17.45■□□□□ 0.38
HPS4-216ENST00000493455 NLRP7Q8WX94 980 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 DPF3Q92784 378 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 PDLIM7Q9NR12 457 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 KCND2Q9NZV8 630 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 TBC1D7Q9P0N9 293 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 COL4A3BPQ9Y5P4 624 aa17.45■□□□□ 0.38
HPS4-216ENST00000493455 SIP14410 1827 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 LRRIQ4A6NIV6 560 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 CCDC169A6NNP5 214 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
HPS4-216ENST00000493455 GAS2O43903 313 aaKnown RBP17.44■□□□□ 0.38
HPS4-216ENST00000493455 PTMSP20962 102 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 GUCY2CP25092 1073 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 NLRP11P59045 1033 aaKnown RBP17.44■□□□□ 0.38
HPS4-216ENST00000493455 LAMTOR4Q0VGL1 99 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 POSTNQ15063 836 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 KIZQ2M2Z5 673 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 LINC01465Q8N7H1 131 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 BSNDQ8WZ55 320 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 KIFAP3Q92845 792 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 IFT74Q96LB3 600 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 TOX2Q96NM4 488 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 HOOK1Q9UJC3 728 aaKnown RBP17.44■□□□□ 0.38
HPS4-216ENST00000493455 DNAH12Q6ZR08 3092 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
HPS4-216ENST00000493455 EVI5O60447 810 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 GLRA2P23416 452 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 ARL2P36404 184 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 PEX3P56589 373 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 MRPS6P82932 125 aaKnown RBP17.43■□□□□ 0.38
HPS4-216ENST00000493455 MAPK7Q13164 816 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 BFSP2Q13515 415 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 SFR1Q86XK3 245 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 CCDC65Q8IXS2 484 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 RNF149Q8NC42 400 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 OSMRQ99650 979 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 C7orf25Q9BPX7 421 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 KIFC3Q9BVG8 833 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 TIPINQ9BVW5 301 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 NUP62CLQ9H1M0 184 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 HIPK3Q9H422 1215 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 PRKAG2Q9UGJ0 569 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 ODF2LQ9ULJ1 636 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 CDY2AQ9Y6F7 541 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 TANC1Q9C0D5 1861 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
HPS4-216ENST00000493455 A0A087WZ62 844 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 CKBP12277 381 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 CYP2C18P33260 490 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 CCL23P55773 120 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
HPS4-216ENST00000493455 CAPSQ13938 189 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 TFDP1Q14186 410 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms