RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CCDC34Q96HJ3 373 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 WRAP73Q9P2S5 460 aaPredicted RBP14.94□□□□□ -0.02
MSH6-208ENST00000493177 STK17AQ9UEE5 414 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 SEPT9Q9UHD8 586 aaPredicted RBP14.94□□□□□ -0.02
MSH6-208ENST00000493177 USP25Q9UHP3 1055 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 TUBE1Q9UJT0 475 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 PCDHA11Q9Y5I1 949 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 MAFBQ9Y5Q3 323 aaPredicted RBP14.94□□□□□ -0.02
MSH6-208ENST00000493177 RRN3P2A6NIE6 340 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 EFCAB14O75071 495 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 OATP04181 439 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 PLA2G4BP0C869 781 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 YWHABP31946 246 aaKnown RBP14.93□□□□□ -0.02
MSH6-208ENST00000493177 GRIN2CQ14957 1233 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 SKOR2Q2VWA4 1001 aaPredicted RBP14.93□□□□□ -0.02
MSH6-208ENST00000493177 TAF2Q6P1X5 1199 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 KRBA2Q6ZNG9 492 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 OTUD6AQ7L8S5 288 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 PLPPR4Q7Z2D5 763 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 KCNK18Q7Z418 384 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 PHOSPHO2Q8TCD6 241 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 SEPT8Q92599 483 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 LARP4BQ92615 738 aaKnown RBP14.93□□□□□ -0.02
MSH6-208ENST00000493177 RAD54LQ92698 747 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 CUEDC2Q9H467 287 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 NRBP2Q9NSY0 501 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 YBX2Q9Y2T7 364 aaKnown RBP14.93□□□□□ -0.02
MSH6-208ENST00000493177 LOXHD1Q8IVV2 1947 aa14.93□□□□□ -0.02
MSH6-208ENST00000493177 ABHD14A-ACY1A0A1B0GW23 586 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 ARHGEF35A5YM69 484 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 M0QZ92 97 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 ZBTB39O15060 712 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 ACTN4O43707 911 aaKnown RBP14.92□□□□□ -0.02
MSH6-208ENST00000493177 TLL1O43897 1013 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 ZNF862O60290 1169 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 TRAK2O60296 914 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 LYPLA2O95372 231 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 EYA4O95677 639 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 CXCL10P02778 98 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 SLFN14P0C7P3 912 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 MYOGP15173 224 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 HOXC8P31273 242 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 AFMP43652 599 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 SLC26A2P50443 739 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 WDR5P61964 334 aaKnown RBP14.92□□□□□ -0.02
MSH6-208ENST00000493177 MCM6Q14566 821 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 E2F4Q16254 413 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 NAALADL2Q58DX5 795 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 XKR9Q5GH70 373 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 XKR3Q5GH77 459 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 PLA2G4FQ68DD2 849 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 SV2BQ7L1I2 683 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 HERC6Q8IVU3 1022 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 KCTD17Q8N5Z5 321 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 VWCEQ96DN2 955 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 FAM167AQ96KS9 214 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 FAM49AQ9H0Q0 323 aaPredicted RBP14.92□□□□□ -0.02
MSH6-208ENST00000493177 BHMT2Q9H2M3 363 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 PRDM12Q9H4Q4 367 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 BLOC1S4Q9NUP1 217 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 RANBP2P49792 3224 aaKnown RBP14.92□□□□□ -0.02
MSH6-208ENST00000493177 SIP14410 1827 aa14.92□□□□□ -0.02
MSH6-208ENST00000493177 TMEM150BA6NC51 233 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 AMHP03971 560 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 CA3P07451 260 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 INSRRP14616 1297 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 ATP4AP20648 1035 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 PLCB4Q15147 1175 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 KLHL40Q2TBA0 621 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 MTERF2Q49AM1 385 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 KANK3Q6NY19 840 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 FAM117BQ6P1L5 589 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 GRAMD1CQ8IYS0 662 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 DBF4BQ8NFT6 615 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 MAFAQ8NHW3 353 aaPredicted RBP14.91□□□□□ -0.02
MSH6-208ENST00000493177 LRRC15Q8TF66 581 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 STAMQ92783 540 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 PAGE5Q96GU1 130 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 CEP170P1Q96L14 293 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 TIGD1Q96MW7 591 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 SH2D3AQ9BRG2 576 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 MAGEF1Q9HAY2 307 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 ANKEF1Q9NU02 776 aa14.91□□□□□ -0.02
MSH6-208ENST00000493177 HOOK1Q9UJC3 728 aaKnown RBP14.91□□□□□ -0.02
MSH6-208ENST00000493177 EVPLQ92817 2033 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 RPLP2P05387 115 aaKnown RBP14.9□□□□□ -0.02
MSH6-208ENST00000493177 KRT18P05783 430 aaKnown RBP14.9□□□□□ -0.02
MSH6-208ENST00000493177 XRCC6P12956 609 aaKnown RBP eCLIP14.9□□□□□ -0.02
MSH6-208ENST00000493177 IGFBP4P22692 258 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 DEFB103AP81534 67 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 AMPD3Q01432 767 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 CAMK4Q16566 473 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 CAVIN1Q6NZI2 390 aaKnown RBP14.9□□□□□ -0.02
MSH6-208ENST00000493177 RUFY4Q6ZNE9 571 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 GPBP1Q86WP2 473 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 MYOCDQ8IZQ8 938 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 ATP8B4Q8TF62 1192 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 DNAJB3Q8WWF6 145 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 BBXQ8WY36 941 aaPredicted RBP14.9□□□□□ -0.02
MSH6-208ENST00000493177 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms