RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ARIH1Q9Y4X5 557 aaPredicted RBP14.01□□□□□ -0.17
COL6A1-205ENST00000492851 PPME1Q9Y570 386 aa14.01□□□□□ -0.17
COL6A1-205ENST00000492851 TBX3O15119 743 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 MARCH6O60337 910 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 PFKFB2O60825 505 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 TDP2O95551 362 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 SKIP12755 728 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 DARSP14868 501 aaKnown RBP14□□□□□ -0.17
COL6A1-205ENST00000492851 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
COL6A1-205ENST00000492851 LTBRP36941 435 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 KRT17Q04695 432 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 SCRN1Q12765 414 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 CAMK1Q14012 370 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 SMAD2Q15796 467 aaKnown RBP14□□□□□ -0.17
COL6A1-205ENST00000492851 LETM2Q2VYF4 491 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 NEK8Q86SG6 692 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 ADHFE1Q8IWW8 467 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 LRRC71Q8N4P6 559 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 EFHBQ8N7U6 833 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 ETNPPLQ8TBG4 499 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 NLRP7Q8WX94 980 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 PPP1R16BQ96T49 567 aa14□□□□□ -0.17
COL6A1-205ENST00000492851 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
COL6A1-205ENST00000492851 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
COL6A1-205ENST00000492851 SEPT9Q9UHD8 586 aaPredicted RBP14□□□□□ -0.17
COL6A1-205ENST00000492851 IGKV6-21A0A0C4DH24 114 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 A0A0U1RQF3 1178 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
COL6A1-205ENST00000492851 SRGAP2BP0DMP2 458 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 PPM1AP35813 382 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
COL6A1-205ENST00000492851 NDUFV1P49821 464 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 PLCB3Q01970 1234 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 PPP2R5CQ13362 524 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 SMAD4Q13485 552 aaKnown RBP13.99□□□□□ -0.17
COL6A1-205ENST00000492851 BMS1Q14692 1282 aaKnown RBP13.99□□□□□ -0.17
COL6A1-205ENST00000492851 NPY5RQ15761 445 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 INF2Q27J81 1249 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 ZNF410Q86VK4 478 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 TLE6Q9H808 572 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 BRMS1Q9HCU9 246 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 TLR9Q9NR96 1032 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 CD207Q9UJ71 328 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 HCN4Q9Y3Q4 1203 aa13.99□□□□□ -0.17
COL6A1-205ENST00000492851 TCF20Q9UGU0 1960 aaKnown RBP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 MAFO75444 373 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 FGF18O76093 207 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 P4HBP07237 508 aaKnown RBP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 SFPQP23246 707 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 DNAJB1P25685 340 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 GATMP50440 423 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 UGCGQ16739 394 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 MTERF2Q49AM1 385 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 OTUD6AQ7L8S5 288 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 ECHDC2Q86YB7 292 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 LRRC43Q8N309 656 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 SLC7A3Q8WY07 619 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 LRFN3Q9BTN0 628 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 TRAIPQ9BWF2 469 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 MRPL9Q9BYD2 267 aaKnown RBP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 KCNMB3Q9NPA1 279 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 NGRNQ9NPE2 291 aaKnown RBP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 CD320Q9NPF0 282 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-205ENST00000492851 KCNJ14Q9UNX9 436 aa13.98□□□□□ -0.17
COL6A1-205ENST00000492851 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 MBTPS2O43462 519 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 CCNT1O60563 726 aaKnown RBP13.97□□□□□ -0.17
COL6A1-205ENST00000492851 EYA4O95677 639 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 FGFR1P11362 822 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 ZP2Q05996 745 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 COASYQ13057 564 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
COL6A1-205ENST00000492851 GJA10Q969M2 543 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 ZNF558Q96NG5 402 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 AIFM3Q96NN9 605 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 CASD1Q96PB1 797 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 CWH43Q9H720 699 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-205ENST00000492851 TPCN1Q9ULQ1 816 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 NLRC5Q86WI3 1866 aa13.97□□□□□ -0.17
COL6A1-205ENST00000492851 PRR33A8MZF0 331 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 ASAP2O43150 1006 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 DCXO43602 365 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 GAS2O43903 313 aaKnown RBP13.96□□□□□ -0.17
COL6A1-205ENST00000492851 STBD1O95210 358 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 IRS1P35568 1242 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 KRT2P35908 639 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 RFC5P40937 340 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 NRIP1P48552 1158 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.17
COL6A1-205ENST00000492851 EPHA7Q15375 998 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 KCNT2Q6UVM3 1135 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 PIK3AP1Q6ZUJ8 805 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 ANO5Q75V66 913 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 RHPN2Q8IUC4 686 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms