RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TRIM14Q14142 442 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 SIM2Q14190 667 aaPredicted RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 SLC9A5Q14940 896 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 EPHA7Q15375 998 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 SEC23AQ15436 765 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.33□□□□□ -1.4
SND1-216ENST00000492840 DARS2Q6PI48 645 aaKnown RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 LYPD4Q6UWN0 246 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 KRT78Q8N1N4 520 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 NAT16Q8N8M0 369 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 GIMAP7Q8NHV1 300 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 COA7Q96BR5 231 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 EAF2Q96CJ1 260 aaPredicted RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 TMX4Q9H1E5 349 aaPredicted RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 TRIT1Q9H3H1 467 aaKnown RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 SEMA4AQ9H3S1 761 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 RRAGCQ9HB90 399 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 C9orf78Q9NZ63 289 aaPredicted RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 RTEL1Q9NZ71 1219 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 L1RE1Q9UN81 338 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 ERVK-7P63135 1459 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 BLMP54132 1417 aaPredicted RBP6.33□□□□□ -1.4
SND1-216ENST00000492840 KIAA1107Q9UPP5 1409 aa6.33□□□□□ -1.4
SND1-216ENST00000492840 GPATCH8Q9UKJ3 1502 aaKnown RBP6.32□□□□□ -1.4
SND1-216ENST00000492840 SSU72P8A0A1W2PR75 194 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 GOLIM4O00461 696 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 DTNBO60941 627 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 FAM163BP0C2L3 166 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
SND1-216ENST00000492840 PEX2P28328 305 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 MRPS9P82933 396 aaKnown RBP6.32□□□□□ -1.4
SND1-216ENST00000492840 BTKQ06187 659 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 TMEM132BQ14DG7 1078 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 ELF2Q15723 593 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 UGT8Q16880 541 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 UVSSAQ2YD98 709 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 PGS1Q32NB8 556 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 NPNTQ6UXI9 565 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 RNF111Q6ZNA4 994 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 CEP68Q76N32 757 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 SLC41A1Q8IVJ1 513 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 RIPOR3Q96MK2 946 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 LRFN3Q9BTN0 628 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 CD244Q9BZW8 370 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
SND1-216ENST00000492840 KCNH7Q9NS40 1196 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 PCDHGB3Q9Y5G1 929 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 SCINQ9Y6U3 715 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 LRRIQ1Q96JM4 1722 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 BCL9LQ86UU0 1499 aa6.32□□□□□ -1.4
SND1-216ENST00000492840 CAMSAP2Q08AD1 1489 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 TMEM82A0PJX8 343 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 GNAT3A8MTJ3 354 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 WASH4PA8MWX3 477 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
SND1-216ENST00000492840 MAFGO15525 162 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 BMP3P12645 472 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 MTHFD2P13995 350 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 FNTBP49356 437 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 SLC5A3P53794 718 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 RNF220Q5VTB9 566 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 MBNL2Q5VZF2 373 aaKnown RBP6.31□□□□□ -1.4
SND1-216ENST00000492840 CCDC62Q6P9F0 684 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 LINC00114Q6XXX2 140 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 LDHAL6AQ6ZMR3 332 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 MMS22LQ6ZRQ5 1243 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 EP400NLQ6ZTU2 488 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 SAPCD2Q86UD0 394 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 OR2C3Q8N628 320 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 UHMK1Q8TAS1 419 aaKnown RBP6.31□□□□□ -1.4
SND1-216ENST00000492840 PIP4K2CQ8TBX8 421 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 UTP4Q969X6 686 aaKnown RBP6.31□□□□□ -1.4
SND1-216ENST00000492840 MYRFLQ96LU7 910 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 PDLIM7Q9NR12 457 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 DSEQ9UL01 958 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 X6R8D5 127 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 UNC13BO14795 1591 aa6.31□□□□□ -1.4
SND1-216ENST00000492840 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
SND1-216ENST00000492840 ALDH2P05091 517 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 HTR1BP28222 390 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 SDHAP31040 664 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 CCT5P48643 541 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 PRIM2P49643 509 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 AGFG1P52594 562 aaKnown RBP6.3□□□□□ -1.4
SND1-216ENST00000492840 SLC16A1P53985 500 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 CACNB3P54284 484 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
SND1-216ENST00000492840 NFKBIBQ15653 356 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 GRIK4Q16099 956 aa6.3□□□□□ -1.4
SND1-216ENST00000492840 PDCD2Q16342 344 aaPredicted RBP6.3□□□□□ -1.4
SND1-216ENST00000492840 MUM1Q2TAK8 710 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms