RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 POMKQ9H5K3 350 aa5.07□□□□□ -1.6
UBR4-215ENST00000492606 PRORYQ9H606 182 aa5.07□□□□□ -1.6
UBR4-215ENST00000492606 CCDC86Q9H6F5 360 aaKnown RBP5.07□□□□□ -1.6
UBR4-215ENST00000492606 CCSER2Q9H7U1 834 aa5.07□□□□□ -1.6
UBR4-215ENST00000492606 SPATA6Q9NWH7 488 aaPredicted RBP5.07□□□□□ -1.6
UBR4-215ENST00000492606 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
UBR4-215ENST00000492606 CA14Q9ULX7 337 aa5.07□□□□□ -1.6
UBR4-215ENST00000492606 DUSP12Q9UNI6 340 aa5.07□□□□□ -1.6
UBR4-215ENST00000492606 NOTCH1P46531 2555 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 A0A096LPE4 126 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 A0A1W2PPZ6 126 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 LAMTOR5O43504 91 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 SIN3BO75182 1162 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 PAGE1O75459 146 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 FGRP09769 529 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 SRFP11831 508 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 GJA9P57773 515 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 PAK2Q13177 524 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 CDC42EP5Q6NZY7 148 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 MCM10Q7L590 875 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 MCF2L2Q86YR7 1114 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 RASGRP4Q8TDF6 673 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.06□□□□□ -1.6
UBR4-215ENST00000492606 UBXN4Q92575 508 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 EAF1Q96JC9 268 aaPredicted RBP5.06□□□□□ -1.6
UBR4-215ENST00000492606 DNAJB12Q9NXW2 375 aaKnown RBP5.06□□□□□ -1.6
UBR4-215ENST00000492606 RAB23Q9ULC3 237 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 PPM1HQ9ULR3 514 aa5.06□□□□□ -1.6
UBR4-215ENST00000492606 DDTLA6NHG4 134 aaPredicted RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 C5orf67F2Z3F1 127 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 PDE2AO00408 941 aaPredicted RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 PER2O15055 1255 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 STRNO43815 780 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 FOXD2O60548 495 aaPredicted RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 GREM1O60565 184 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 TAF5LO75529 589 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 MMP1P03956 469 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 KRT10P13645 584 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 ATF4P18848 351 aaPredicted RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 CTNNB1P35222 781 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 KCNJ4P48050 445 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 BACE1P56817 501 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 PCBP4P57723 403 aaKnown RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 EIF4A1P60842 406 aaKnown RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 TDGQ13569 410 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 DCTN1Q14203 1278 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 PERM1Q5SV97 790 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 CNKSR3Q6P9H4 555 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 FBXL19Q6PCT2 694 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 DTHD1Q6ZMT9 781 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 SV2BQ7L1I2 683 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 ZNF804AQ7Z570 1209 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 PHC3Q8NDX5 983 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 PIP4K2CQ8TBX8 421 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 TMEM74Q96NL1 305 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 PSMG3-AS1Q96PY0 264 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 CDC5LQ99459 802 aaKnown RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 LPIN3Q9BQK8 851 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 MOV10L1Q9BXT6 1211 aaKnown RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 IRX2Q9BZI1 471 aaPredicted RBP5.05□□□□□ -1.6
UBR4-215ENST00000492606 FZD8Q9H461 694 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 WNT16Q9UBV4 365 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 TLR6Q9Y2C9 796 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 AKAP2Q9Y2D5 859 aa5.05□□□□□ -1.6
UBR4-215ENST00000492606 ATG2BQ96BY7 2078 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 A0A087WV48 116 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 ADARB2-AS1A8MUL3 147 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 PDE8AO60658 829 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 SNAI1O95863 264 aaPredicted RBP5.04□□□□□ -1.6
UBR4-215ENST00000492606 CEACAM1P13688 526 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 BMP6P22004 513 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 PTGS1P23219 599 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 BMPR1AP36894 532 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 JAG1P78504 1218 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 SRSF11Q05519 484 aaKnown RBP5.04□□□□□ -1.6
UBR4-215ENST00000492606 CHRNDQ07001 517 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 RBL2Q08999 1139 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 SF3A1Q15459 793 aaKnown RBP5.04□□□□□ -1.6
UBR4-215ENST00000492606 ZNF423Q2M1K9 1284 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 SV2AQ7L0J3 742 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 VN1R5Q7Z5H4 357 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 FCHSD1Q86WN1 690 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 FMNL3Q8IVF7 1028 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 CHCHD4Q8N4Q1 142 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
UBR4-215ENST00000492606 PPP1R13LQ8WUF5 828 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 DHX38Q92620 1227 aaKnown RBP5.04□□□□□ -1.6
UBR4-215ENST00000492606 MYL10Q9BUA6 226 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 CARD11Q9BXL7 1154 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 TANGO6Q9C0B7 1094 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 ANKRD2Q9GZV1 360 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 ADAM19Q9H013 955 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 GREM2Q9H772 168 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 MBIPQ9NS73 344 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 TMOD4Q9NZQ9 345 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 FAM184BQ9ULE4 1060 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 SOX13Q9UN79 622 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 INPP5FQ9Y2H2 1132 aa5.04□□□□□ -1.6
UBR4-215ENST00000492606 ASCC3Q8N3C0 2202 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms