RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MOXD1Q6UVY6 613 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 ADGRD2Q7Z7M1 963 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 THNSL1Q8IYQ7 743 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 METTL13Q8N6R0 699 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 COLGALT1Q8NBJ5 622 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 MICAL1Q8TDZ2 1067 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 MRPS27Q92552 414 aaKnown RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 SLC5A5Q92911 643 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 JAKMIP1Q96N16 626 aaKnown RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 OSMRQ99650 979 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 TRAIPQ9BWF2 469 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 PHF7Q9BWX1 381 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 CWH43Q9H720 699 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 NAP1L2Q9ULW6 460 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-212ENST00000492407 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 SNX14Q9Y5W7 946 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 NLRC5Q86WI3 1866 aa10.31□□□□□ -0.76
HDAC3-212ENST00000492407 CYP3A7-CYP3A51PA0A087WV96 503 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 A0A0U1RQF3 1178 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 MSH4O15457 936 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 SKIP12755 728 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 DARSP14868 501 aaKnown RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 HOXB8P17481 243 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 CYP3A7P24462 503 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 KCNC3Q14003 757 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 BMS1Q14692 1282 aaKnown RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 TARBP2Q15633 366 aaKnown RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 CLUL1Q15846 466 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 LRRC43Q8N309 656 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 SUSD6Q92537 303 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 CASD1Q96PB1 797 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 JPH2Q9BR39 696 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 TEKT3Q9BXF9 490 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 MRPL9Q9BYD2 267 aaKnown RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 INO80BQ9C086 356 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-212ENST00000492407 STK39Q9UEW8 545 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 AKT3Q9Y243 479 aa10.3□□□□□ -0.76
HDAC3-212ENST00000492407 IGKV6-21A0A0C4DH24 114 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ZNF862O60290 1169 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 GAS7O60861 476 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 GLP2RO95838 553 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 VTNP04004 478 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 GATMP50440 423 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 DNM2P50570 870 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 GPC3P51654 580 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ERVFC1P60507 584 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 TBC1D8BQ0IIM8 1120 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 XKR3Q5GH77 459 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 KCNT2Q6UVM3 1135 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 B3GNT9Q6UX72 402 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 RBM23Q86U06 439 aaKnown RBP10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ZNF598Q86UK7 904 aaKnown RBP10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ECHDC2Q86YB7 292 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ABI1Q8IZP0 508 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 PHKBQ93100 1093 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ZNF274Q96GC6 653 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-212ENST00000492407 MBOAT7Q96N66 472 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 ZNF558Q96NG5 402 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 SLC26A6Q9BXS9 759 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 GCOM2Q9BZD3 368 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-212ENST00000492407 TM6SF1Q9BZW5 370 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 SPG21Q9NZD8 308 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 PCDHA4Q9UN74 947 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 USP15Q9Y4E8 981 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-212ENST00000492407 PPME1Q9Y570 386 aa10.29□□□□□ -0.76
HDAC3-212ENST00000492407 EDIL3O43854 480 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 DKC1O60832 514 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC3-212ENST00000492407 PPFIA3O75145 1194 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 PSMD10O75832 226 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 DEXIO95424 95 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 FGFR1P11362 822 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 CLCN3P51790 818 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 NUBP1P53384 320 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 NLRP5P59047 1200 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 ZXDAP98168 799 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 PRKCEQ02156 737 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 SSRP1Q08945 709 aaKnown RBP10.28□□□□□ -0.76
HDAC3-212ENST00000492407 MAPK8IP2Q13387 824 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-212ENST00000492407 GIT2Q14161 759 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 LRCH2Q5VUJ6 765 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 ANKRD54Q6NXT1 300 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 CPLX2Q6PUV4 134 aaKnown RBP10.28□□□□□ -0.76
HDAC3-212ENST00000492407 LRRC55Q6ZSA7 311 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 HFE2Q6ZVN8 426 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 RUFY3Q7L099 469 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 CASP10Q92851 521 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 NECTIN4Q96NY8 510 aa10.28□□□□□ -0.76
HDAC3-212ENST00000492407 S1PR5Q9H228 398 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms