RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZNF746Q6NUN9 644 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 FOXR2Q6PJQ5 311 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 EPB41L5Q9HCM4 733 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 TUFT1Q9NNX1 390 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 PEX10O60683 326 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 COPB2P35606 906 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 PSMC2P35998 433 aaKnown RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 DDX42Q86XP3 938 aaKnown RBP eCLIP13.58□□□□□ -0.244e-6■□□□□ 10.9
HMGN1-220ENST00000492280 MXRA8Q9BRK3 442 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
HMGN1-220ENST00000492280 DNAJC12Q9UKB3 198 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 USP20Q9Y2K6 914 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 PCDHGC5Q9Y5F6 944 aa13.58□□□□□ -0.24
HMGN1-220ENST00000492280 ANKRD65E5RJM6 399 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 CEP104O60308 925 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 GCLMP48507 274 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 JAM2P57087 298 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 CFAP221Q4G0U5 840 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 HS2ST1Q7LGA3 356 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 OLIG1Q8TAK6 271 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 CLEC4DQ8WXI8 215 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 INPP4AQ96PE3 977 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-220ENST00000492280 NACC1Q96RE7 527 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-220ENST00000492280 F8VZ95 297 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 RAD51CO43502 376 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 ITGA4P13612 1032 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 RPS6P62753 249 aaKnown RBP13.57□□□□□ -0.24
HMGN1-220ENST00000492280 RTKN2Q8IZC4 609 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 SLC20A1Q8WUM9 679 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 PLCB1Q9NQ66 1216 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 ZNRF3Q9ULT6 936 aa13.57□□□□□ -0.24
HMGN1-220ENST00000492280 GOLGA6BA6NDN3 693 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 CALCAP01258 141 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 GAP43P17677 238 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 USP8P40818 1118 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 PTGER2P43116 358 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 ZSCAN26Q16670 478 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 KCTD16Q68DU8 428 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 CCDC70Q6NSX1 233 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 RNF10Q8N5U6 811 aaKnown RBP13.56□□□□□ -0.24
HMGN1-220ENST00000492280 ARHGEF26Q96DR7 871 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 GPR88Q9GZN0 384 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 DDX47Q9H0S4 455 aaKnown RBP13.56□□□□□ -0.24
HMGN1-220ENST00000492280 FEM1BQ9UK73 627 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 RIPK3Q9Y572 518 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 KIF13BQ9NQT8 1826 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 BACH1O14867 736 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 SLC16A4O15374 487 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
HMGN1-220ENST00000492280 DHX15O43143 795 aaKnown RBP13.56□□□□□ -0.24
HMGN1-220ENST00000492280 ICAM1P05362 532 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 ASNSP08243 561 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 GALCP54803 685 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 TUBB4BP68371 445 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 MYL7Q01449 175 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 PLEKHO2Q8TD55 490 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 EXOC4Q96A65 974 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 INTS2Q9H0H0 1204 aaKnown RBP13.56□□□□□ -0.24
HMGN1-220ENST00000492280 METTL14Q9HCE5 456 aaKnown RBP13.56□□□□□ -0.24
HMGN1-220ENST00000492280 PGAP2Q9UHJ9 254 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 EMSYQ7Z589 1322 aa13.56□□□□□ -0.24
HMGN1-220ENST00000492280 PHF20L1A8MW92 1017 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 KIF4AO95239 1232 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 KRT14P02533 472 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 MTMR1Q13613 665 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 PRKG1Q13976 671 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 RPS6KA1Q15418 735 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 ARHGEF19Q8IW93 802 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 CASKIN2Q8WXE0 1202 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 SAAL1Q96ER3 474 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 LUC7LQ9NQ29 371 aaKnown RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 FRMD4BQ9Y2L6 1034 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 GJA3Q9Y6H8 435 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 ZNF131P52739 623 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 PEX3P56589 373 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 PPP3CAQ08209 521 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 TAF3Q5VWG9 929 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 AADACL2Q6P093 401 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 B3GNT9Q6UX72 402 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 SYTL5Q8TDW5 730 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 ATG4CQ96DT6 458 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms