RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 BMS1Q14692 1282 aaKnown RBP16.4■□□□□ 0.22
SSR4-212ENST00000491833 ECHDC2Q86YB7 292 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 SLC39A11Q8N1S5 342 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 MRPL9Q9BYD2 267 aaKnown RBP16.4■□□□□ 0.22
SSR4-212ENST00000491833 MFSD1Q9H3U5 465 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 DZANK1Q9NVP4 752 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 CFAP54Q96N23 3096 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 MYH9P35579 1960 aaKnown RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 SMCO2A6NFE2 343 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 DHX15O43143 795 aaKnown RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 CLASP2O75122 1294 aaKnown RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 CLLU1OSQ5K130 101 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 MCTP2Q6DN12 878 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 APOA5Q6Q788 366 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 SMAP1Q8IYB5 467 aaPredicted RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 MRPL43Q8N983 215 aaKnown RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 ZNF577Q9BSK1 485 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
SSR4-212ENST00000491833 MAFBQ9Y5Q3 323 aaPredicted RBP16.39■□□□□ 0.21
SSR4-212ENST00000491833 DENND4AQ7Z401 1863 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 MAGEB2O15479 319 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 PSAPP07602 524 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 TMOD1P28289 359 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 NLRP11P59045 1033 aaKnown RBP16.38■□□□□ 0.21
SSR4-212ENST00000491833 RTN1Q16799 776 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 RARS2Q5T160 578 aaKnown RBP16.38■□□□□ 0.21
SSR4-212ENST00000491833 ASTLQ6HA08 431 aaPredicted RBP16.38■□□□□ 0.21
SSR4-212ENST00000491833 ZDHHC14Q8IZN3 488 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 ZNF710Q8N1W2 664 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 TMEM169Q96HH4 297 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 FAM167AQ96KS9 214 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 SCLT1Q96NL6 688 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
SSR4-212ENST00000491833 SMOC2Q9H3U7 446 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 DBR1Q9UK59 544 aaKnown RBP16.38■□□□□ 0.21
SSR4-212ENST00000491833 DMDP11532 3685 aa16.38■□□□□ 0.21
SSR4-212ENST00000491833 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.37■□□□□ 0.21
SSR4-212ENST00000491833 ASGR2P07307 311 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 WEE2P0C1S8 567 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 EIF4BP23588 611 aaKnown RBP16.37■□□□□ 0.21
SSR4-212ENST00000491833 ALDH7A1P49419 539 aaKnown RBP16.37■□□□□ 0.21
SSR4-212ENST00000491833 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSR4-212ENST00000491833 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 EFCAB12Q6NXP0 572 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 LRRC71Q8N4P6 559 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 LINC01465Q8N7H1 131 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 NKD2Q969F2 451 aaPredicted RBP16.37■□□□□ 0.21
SSR4-212ENST00000491833 ZBP1Q9H171 429 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 PPP4R2Q9NY27 417 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 USTQ9Y2C2 406 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
SSR4-212ENST00000491833 ZFHX2Q9C0A1 2572 aaPredicted RBP16.37■□□□□ 0.21
SSR4-212ENST00000491833 A0A0U1RQF3 1178 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 CARNS1A5YM72 827 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 EOMESO95936 686 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 CYP3A4P08684 503 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 GPC3P51654 580 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 FUT2Q10981 343 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 ATAT1Q5SQI0 421 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 RSPH1Q8WYR4 309 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 ADAMTS10Q9H324 1103 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 SAMM50Q9Y512 469 aa16.36■□□□□ 0.21
SSR4-212ENST00000491833 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
SSR4-212ENST00000491833 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 GOLGA8BA8MQT2 603 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 NT5C1B-RDH14C9J2C7 533 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 ZBTB43O43298 467 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.21
SSR4-212ENST00000491833 CXCL14O95715 111 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 OATP04181 439 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 DARSP14868 501 aaKnown RBP16.35■□□□□ 0.21
SSR4-212ENST00000491833 CLCN5P51795 746 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 BCAR1P56945 870 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 GIT2Q14161 759 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 FRMD5Q7Z6J6 570 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 ZNF598Q86UK7 904 aaKnown RBP16.35■□□□□ 0.21
SSR4-212ENST00000491833 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 C12orf76Q8N812 135 aaPredicted RBP16.35■□□□□ 0.21
SSR4-212ENST00000491833 CRYGNQ8WXF5 182 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 ZNF668Q96K58 619 aaPredicted RBP16.35■□□□□ 0.21
SSR4-212ENST00000491833 LIMD1Q9UGP4 676 aa16.35■□□□□ 0.21
SSR4-212ENST00000491833 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 WDR64B1ANS9 1081 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 EPCAMP16422 314 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms