RNA–Protein interactions for RNA: ENST00000491816.1

PARP1-208, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 416 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-208ENST00000491816 R3HDMLQ9H3Y0 253 aa7.42□□□□□ -1.22
PARP1-208ENST00000491816 RRP7AQ9Y3A4 280 aaKnown RBP7.42□□□□□ -1.22
PARP1-208ENST00000491816 COL4A1P02462 1669 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 BBOX1O75936 387 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 MYL6BP14649 208 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 PRKAR2BP31323 418 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 SMAD4Q13485 552 aaKnown RBP7.41□□□□□ -1.22
PARP1-208ENST00000491816 MRPL58Q14197 206 aaKnown RBP7.41□□□□□ -1.22
PARP1-208ENST00000491816 PPP1R42Q7Z4L9 355 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 ZBTB8AQ96BR9 441 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 DDX11Q96FC9 970 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 MIS18AQ9NYP9 233 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 SCAF8Q9UPN6 1271 aaKnown RBP7.41□□□□□ -1.22
PARP1-208ENST00000491816 RTL9Q8NET4 1388 aa7.41□□□□□ -1.22
PARP1-208ENST00000491816 TRIOBPQ9H2D6 2365 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 UBE2Q2LH0YL09 131 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 CBFA2T2O43439 604 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 ECE2O60344 883 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 VAMP4O75379 141 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 HSPA5P11021 654 aaKnown RBP7.4□□□□□ -1.22
PARP1-208ENST00000491816 ITGA4P13612 1032 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 EN2P19622 333 aaPredicted RBP7.4□□□□□ -1.22
PARP1-208ENST00000491816 TM4SF4P48230 202 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 SLC10A5Q5PT55 438 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 CC2D1BQ5T0F9 858 aaKnown RBP7.4□□□□□ -1.22
PARP1-208ENST00000491816 TAB3Q8N5C8 712 aaPredicted RBP7.4□□□□□ -1.22
PARP1-208ENST00000491816 ADCY4Q8NFM4 1077 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.22
PARP1-208ENST00000491816 TM9SF2Q99805 663 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 NTMQ9P121 344 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 TRIM17Q9Y577 477 aa7.4□□□□□ -1.22
PARP1-208ENST00000491816 ZNF646O15015 1829 aaPredicted RBP7.4□□□□□ -1.23
PARP1-208ENST00000491816 RPS12P25398 132 aaKnown RBP7.39□□□□□ -1.23
PARP1-208ENST00000491816 FKBP1BP68106 108 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 CACNB2Q08289 660 aaPredicted RBP7.39□□□□□ -1.23
PARP1-208ENST00000491816 GRAPQ13588 217 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 CNGB1Q14028 1251 aaPredicted RBP7.39□□□□□ -1.23
PARP1-208ENST00000491816 PARP10Q53GL7 1025 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 PRAMEF18Q5VWM3 479 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 FBXW10Q5XX13 1052 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 DDX46Q7L014 1031 aaKnown RBP7.39□□□□□ -1.23
PARP1-208ENST00000491816 CPNE8Q86YQ8 564 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 LZTR1Q8N653 840 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 SLC17A8Q8NDX2 589 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 GRAPLQ8TC17 118 aaPredicted RBP7.39□□□□□ -1.23
PARP1-208ENST00000491816 LOXL4Q96JB6 756 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 C8orf49Q96NF6 230 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 FERD3LQ96RJ6 166 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 UTP14AQ9BVJ6 771 aaKnown RBP7.39□□□□□ -1.23
PARP1-208ENST00000491816 GULP1Q9UBP9 304 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 SIT1Q9Y3P8 196 aa7.39□□□□□ -1.23
PARP1-208ENST00000491816 AURKAO14965 403 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 DPY19L1Q2PZI1 675 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 CPZQ66K79 652 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 RCSD1Q6JBY9 416 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 OTOP1Q7RTM1 612 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 CABP7Q86V35 215 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 ADAMTS17Q8TE56 1095 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 CPA5Q8WXQ8 436 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 PEX11GQ96HA9 241 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 MTA3Q9BTC8 594 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 THUMPD2Q9BTF0 503 aaKnown RBP7.38□□□□□ -1.23
PARP1-208ENST00000491816 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
PARP1-208ENST00000491816 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
PARP1-208ENST00000491816 ZSWIM8A7E2V4 1837 aa7.38□□□□□ -1.23
PARP1-208ENST00000491816 ECM29Q5VYK3 1845 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 SPEF2Q9C093 1822 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 STXBP3O00186 592 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 FSHBP01225 129 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 IMPDH2P12268 514 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 GUCY2CP25092 1073 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 GPSM2P81274 684 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 SREBF2Q12772 1141 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 TCEAL1Q15170 157 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 TAF7Q15545 349 aaPredicted RBP7.37□□□□□ -1.23
PARP1-208ENST00000491816 EEF1DP3Q658K8 133 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 SLC16A11Q8NCK7 471 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 CELF1Q92879 486 aaKnown RBP7.37□□□□□ -1.23
PARP1-208ENST00000491816 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 POLLQ9UGP5 575 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 CEP290O15078 2479 aa7.37□□□□□ -1.23
PARP1-208ENST00000491816 H0YGN5 161 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 VIL1P09327 827 aaKnown RBP7.36□□□□□ -1.23
PARP1-208ENST00000491816 ZNF20P17024 532 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 ERCC3P19447 782 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 PRKG1Q13976 671 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 LDLRAD1Q5T700 205 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 NETO2Q8NC67 525 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 GIPC2Q8TF65 315 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 EYA3Q99504 573 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 GORASP1Q9BQQ3 440 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 PTPN22Q9Y2R2 807 aa7.36□□□□□ -1.23
PARP1-208ENST00000491816 ZNF609O15014 1411 aa7.35□□□□□ -1.23
PARP1-208ENST00000491816 SH3TC1Q8TE82 1336 aa7.35□□□□□ -1.23
PARP1-208ENST00000491816 SMARCA5O60264 1052 aaPredicted RBP7.35□□□□□ -1.23
PARP1-208ENST00000491816 PLATP00750 562 aa7.35□□□□□ -1.23
PARP1-208ENST00000491816 ANXA1P04083 346 aa7.35□□□□□ -1.23
PARP1-208ENST00000491816 C8BP07358 591 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms