RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CCDC148Q8NFR7 591 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 CCDC12Q8WUD4 166 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-211ENST00000491581 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-211ENST00000491581 SAMD11Q96NU1 681 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 PHF20Q9BVI0 1012 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 TEKT3Q9BXF9 490 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 CLEC1BQ9P126 229 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 TCEAL9Q9UHQ7 104 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 PCDHB7Q9Y5E2 793 aa10.05□□□□□ -0.8
HDAC3-211ENST00000491581 A0A087WZ62 844 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 CPLX1O14810 134 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 MBTPS2O43462 519 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 AFF1P51825 1210 aaKnown RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 TARBP2Q15633 366 aaKnown RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 Q4G0T1 1027 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 KANK3Q6NY19 840 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 ANO5Q75V66 913 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 TMEM173Q86WV6 379 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 GJD3Q8N144 294 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 NME8Q8N427 588 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 COLGALT1Q8NBJ5 622 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 HELQQ8TDG4 1101 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 HAS1Q92839 578 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 MBOAT7Q96N66 472 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 CASD1Q96PB1 797 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 FDXACB1Q9BRP7 624 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 C11orf84Q9BUA3 381 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 TM6SF1Q9BZW5 370 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 RGL1Q9NZL6 768 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 DDX25Q9UHL0 483 aaKnown RBP10.04□□□□□ -0.8
HDAC3-211ENST00000491581 VAV3Q9UKW4 847 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 SQORQ9Y6N5 450 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 TTC28Q96AY4 2481 aa10.04□□□□□ -0.8
HDAC3-211ENST00000491581 CYP3A7-CYP3A51PA0A087WV96 503 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 HIDE1A8MVS5 230 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 PFKFB2O60825 505 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 FGF18O76093 207 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 RB1P06400 928 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 CYP3A7P24462 503 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 USP11P51784 963 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 GUCY1B3Q02153 619 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 CYP4A11Q02928 519 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 ZP2Q05996 745 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 ADAM15Q13444 863 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 NONOQ15233 471 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC3-211ENST00000491581 PLPP4Q5VZY2 271 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 LLGL2Q6P1M3 1020 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 SLC24A5Q71RS6 500 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 ECHDC2Q86YB7 292 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-211ENST00000491581 NLRP7Q8WX94 980 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 AUTS2Q8WXX7 1259 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 NLRP4Q96MN2 994 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 RIT2Q99578 217 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 FTHL17Q9BXU8 183 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 SLKQ9H2G2 1235 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-211ENST00000491581 MINDY3Q9H8M7 445 aa10.03□□□□□ -0.8
HDAC3-211ENST00000491581 GPR182O15218 404 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 CCNT1O60563 726 aaKnown RBP10.02□□□□□ -0.81
HDAC3-211ENST00000491581 WEE2P0C1S8 567 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 STAG3L1P0CL83 205 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 DARSP14868 501 aaKnown RBP10.02□□□□□ -0.81
HDAC3-211ENST00000491581 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.81
HDAC3-211ENST00000491581 NDUFV1P49821 464 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 FAM189BP81408 668 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 TBC1D8BQ0IIM8 1120 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
HDAC3-211ENST00000491581 NCAPH2Q6IBW4 605 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 RHPN2Q8IUC4 686 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 THNSL1Q8IYQ7 743 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 MICAL1Q8TDZ2 1067 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 TNFRSF25Q93038 417 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 TMEM143Q96AN5 459 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 DYDC2Q96IM9 177 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 MSLNLQ96KJ4 702 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 KCNMB3Q9NPA1 279 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-211ENST00000491581 MUTYHQ9UIF7 546 aa10.02□□□□□ -0.81
HDAC3-211ENST00000491581 BTBD18B2RXH4 712 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 PI4K2BG5E9Z4 385 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 NEFLP07196 543 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 JAK3P52333 1124 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 SPIRE1Q08AE8 756 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 ZNF598Q86UK7 904 aaKnown RBP10.01□□□□□ -0.81
HDAC3-211ENST00000491581 NSUN7Q8NE18 718 aaKnown RBP10.01□□□□□ -0.81
HDAC3-211ENST00000491581 P2RX5Q93086 422 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 FAM167AQ96KS9 214 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 MAP7D2Q96T17 732 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms