RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SUGP1Q8IWZ8 645 aaKnown RBP9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 LRRC43Q8N309 656 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 KCNB2Q92953 911 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 LENG9Q96B70 501 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 IRF2BPLQ9H1B7 796 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 SNX14Q9Y5W7 946 aa9.57□□□□□ -0.88
APOBEC3F-204ENST00000491387 A0A0U1RQF3 1178 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 KLF18A0A0U1RQI7 1052 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 DDX39AO00148 427 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 PRPF3O43395 683 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 ZNF862O60290 1169 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 VTNP04004 478 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 DARSP14868 501 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 TMOD1P28289 359 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 GNA11P29992 359 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 CDC42EP1Q00587 391 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 KRT17Q04695 432 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 ITIH3Q06033 890 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 JAKMIP3Q5VZ66 844 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 SLC39A11Q8N1S5 342 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 METTL13Q8N6R0 699 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 MRPL43Q8N983 215 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 RPGRIP1Q96KN7 1286 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 ZNF558Q96NG5 402 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 NECTIN4Q96NY8 510 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 RIT2Q99578 217 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 TCF25Q9BQ70 676 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 LARP6Q9BRS8 491 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 C6orf50Q9HD87 102 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 CHST12Q9NRB3 414 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 SPG21Q9NZD8 308 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 IRAK3Q9Y616 596 aa9.56□□□□□ -0.88
APOBEC3F-204ENST00000491387 C2orf71A6NGG8 1288 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 HIDE1A8MVS5 230 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 WDR64B1ANS9 1081 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 EDIL3O43854 480 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 ST18O60284 1047 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 ZSCAN20P17040 1043 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 AVPR2P30518 371 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 TECP42680 631 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 GPC3P51654 580 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 USP11P51784 963 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 CLCN3P51790 818 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 NLRP11P59045 1033 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 TARBP2Q15633 366 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 TPRNQ4KMQ1 711 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 CLLU1OSQ5K130 101 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 PLPP4Q5VZY2 271 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 EFCAB12Q6NXP0 572 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 Q6ZUG5 572 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 CKAP2LQ8IYA6 745 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 UBALD2Q8IYN6 164 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 RDM1Q8NG50 284 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 BICD2Q8TD16 824 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 CASP10Q92851 521 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 JAKMIP1Q96N16 626 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 MRPL9Q9BYD2 267 aaKnown RBP9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 AGXT2Q9BYV1 514 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 ADAM7Q9H2U9 754 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 DISC1Q9NRI5 854 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 NRBP2Q9NSY0 501 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 GABBR1Q9UBS5 961 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 GVINP1Q7Z2Y8 2422 aa9.55□□□□□ -0.88
APOBEC3F-204ENST00000491387 IGKV6-21A0A0C4DH24 114 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 PROB1E7EW31 1015 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 MSH4O15457 936 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 OATP04181 439 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 SFNP31947 248 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 HSPA4P34932 840 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 METAP2P50579 478 aaKnown RBP eCLIP9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 JAK3P52333 1124 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 POLGP54098 1239 aaPredicted RBP9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 EVCP57679 992 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 SMC1AQ14683 1233 aaKnown RBP9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 NTRK3Q16288 839 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 PRR16Q569H4 304 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 B3GNT9Q6UX72 402 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 TMC7Q7Z402 723 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 ABI1Q8IZP0 508 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 SLC5A5Q92911 643 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 BRF1Q92994 677 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 RIPOR3Q96MK2 946 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 CEP89Q96ST8 783 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 RNF26Q9BY78 433 aaPredicted RBP9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 NIFKQ9BYG3 293 aaKnown RBP9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 ENTPD7Q9NQZ7 604 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 DACT1Q9NYF0 836 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 TCEAL9Q9UHQ7 104 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 NAP1L2Q9ULW6 460 aaPredicted RBP9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 AKT3Q9Y243 479 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 NR2E1Q9Y466 385 aa9.54□□□□□ -0.88
APOBEC3F-204ENST00000491387 HCFC2Q9Y5Z7 792 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms