RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 RNPEPQ9H4A4 650 aa9.72□□□□□ -0.85
CMSS1-206ENST00000491299 BCAS3Q9H6U6 928 aa9.72□□□□□ -0.85
CMSS1-206ENST00000491299 AGO4Q9HCK5 861 aaKnown RBP9.72□□□□□ -0.85
CMSS1-206ENST00000491299 CXXC1Q9P0U4 656 aaPredicted RBP9.72□□□□□ -0.85
CMSS1-206ENST00000491299 TPCN1Q9ULQ1 816 aa9.72□□□□□ -0.85
CMSS1-206ENST00000491299 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
CMSS1-206ENST00000491299 NRCAMQ92823 1304 aa9.72□□□□□ -0.85
CMSS1-206ENST00000491299 RSPH10B2B2RC85 870 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 DDX39AO00148 427 aaKnown RBP9.71□□□□□ -0.86
CMSS1-206ENST00000491299 MEIS1O00470 390 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 BACH1O14867 736 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 DTNBO60941 627 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 EFCAB14O75071 495 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 RPLP2P05387 115 aaKnown RBP9.71□□□□□ -0.86
CMSS1-206ENST00000491299 CYP3A4P08684 503 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 RSPH10BP0C881 870 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 VSIG8P0DPA2 414 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 ARP10275 920 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 RNF144AP50876 292 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-206ENST00000491299 ZNF200P98182 395 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-206ENST00000491299 INSM1Q01101 510 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-206ENST00000491299 ME3Q16798 604 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 ZNF618Q5T7W0 954 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 FAM160B1Q5W0V3 765 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 GALNT17Q6IS24 598 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 TAF2Q6P1X5 1199 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 CNKSR3Q6P9H4 555 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 PRICKLE2Q7Z3G6 844 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 SERINC5Q86VE9 423 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 NECAB1Q8N987 351 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 CYP2W1Q8TAV3 490 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 WASF1Q92558 559 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 DHX38Q92620 1227 aaKnown RBP9.71□□□□□ -0.86
CMSS1-206ENST00000491299 TMX3Q96JJ7 454 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 ZNF577Q9BSK1 485 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 ZNF576Q9H609 170 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 SLC28A3Q9HAS3 691 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 TBC1D22BQ9NU19 505 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 SETD4Q9NVD3 440 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 PCDHA4Q9UN74 947 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 LIMCH1Q9UPQ0 1083 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 TET1Q8NFU7 2136 aa9.71□□□□□ -0.86
CMSS1-206ENST00000491299 GSTTP1A0A1W2PQM5 241 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 SLC35F4A4IF30 521 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 RRN3P2A6NIE6 340 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 GRXCR1A8MXD5 290 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 FAM86B1E9PN63 330 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 K7ELQ4 463 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-206ENST00000491299 M0QZ92 97 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 IPO5O00410 1097 aaKnown RBP9.7□□□□□ -0.86
CMSS1-206ENST00000491299 TREHO43280 583 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 CTSHP09668 335 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 FAM86B2P0C5J1 330 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 FOSL2P15408 326 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 RHOQP17081 205 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 SLC26A2P50443 739 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 STAT5BP51692 787 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 ACTR2P61160 394 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 SCRN1Q12765 414 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 IKBKEQ14164 716 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 BECN1Q14457 450 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 GRIK4Q16099 956 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 PRR16Q569H4 304 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 MIS18BP1Q6P0N0 1132 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 PHTF2Q8N3S3 785 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 PHOSPHO2Q8TCD6 241 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 RASGRP4Q8TDF6 673 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 LMBR1Q8WVP7 490 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 CTAGE1Q96RT6 745 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 GAS2L1Q99501 681 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-206ENST00000491299 BRMS1Q9HCU9 246 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 TUBE1Q9UJT0 475 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 SAMM50Q9Y512 469 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 STK36Q9NRP7 1315 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 MYO9BQ13459 2157 aa9.7□□□□□ -0.86
CMSS1-206ENST00000491299 CCDC194A0A1B0GVG4 234 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 PFKFB2O60825 505 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 LGR5O75473 907 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 CXCL10P02778 98 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 HOXC8P31273 242 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 SOX11P35716 441 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 MCM2P49736 904 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 USP11P51784 963 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 IGBP1P78318 339 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 KRT76Q01546 638 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 ST3GAL1Q11201 340 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 CLN3Q13286 438 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 ITGB3BPQ13352 177 aaPredicted RBP9.69□□□□□ -0.86
CMSS1-206ENST00000491299 NONOQ15233 471 aaKnown RBP eCLIP9.69□□□□□ -0.867e-9■■□□□ 12.4
CMSS1-206ENST00000491299 TRIM71Q2Q1W2 868 aaKnown RBP9.69□□□□□ -0.86
CMSS1-206ENST00000491299 MICAL3Q7RTP6 2002 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 PLPPR4Q7Z2D5 763 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 CCDC83Q8IWF9 413 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 CKAP2LQ8IYA6 745 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 SMAP1Q8IYB5 467 aaPredicted RBP9.69□□□□□ -0.86
CMSS1-206ENST00000491299 BLIDQ8IZY5 108 aa9.69□□□□□ -0.86
CMSS1-206ENST00000491299 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
CMSS1-206ENST00000491299 GUCD1Q96NT3 240 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms