RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SENP6Q9GZR1 1112 aaPredicted RBP12.13□□□□□ -0.47
VARS2-210ENST00000490699 C11orf49Q9H6J7 331 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 DHX33Q9H6R0 707 aaKnown RBP12.13□□□□□ -0.47
VARS2-210ENST00000490699 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 PANK4Q9NVE7 773 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 HDAC6Q9UBN7 1215 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 SEL1LQ9UBV2 794 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 AKT3Q9Y243 479 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 ARVCFO00192 962 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 ZBTB39O15060 712 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 ASAP2O43150 1006 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 STBD1O95210 358 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 RPN1P04843 607 aaKnown RBP12.12□□□□□ -0.47
VARS2-210ENST00000490699 CYP2C9P11712 490 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 RAD51AP2Q09MP3 1159 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 STIM1Q13586 685 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 TARBP2Q15633 366 aaKnown RBP12.12□□□□□ -0.47
VARS2-210ENST00000490699 PTGISQ16647 500 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 MTHFD1LQ6UB35 978 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 C1orf186Q6ZWK4 172 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 MYCT1Q8N699 235 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 TRAPPC12Q8WVT3 735 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 SH2D3AQ9BRG2 576 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 REEP2Q9BRK0 252 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
VARS2-210ENST00000490699 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
VARS2-210ENST00000490699 SMIM35A0A1B0GVV1 85 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 MYMKA6NI61 221 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 HIP1RO75146 1068 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 C22orf31O95567 290 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 PPP1R2P41236 205 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 RTP1P59025 263 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 PSMD2Q13200 908 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 PNOCQ13519 176 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 CUL4BQ13620 913 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 ALCAMQ13740 583 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
VARS2-210ENST00000490699 ODR4Q5SWX8 454 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 SH3RF1Q7Z6J0 888 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 ZBTB8OSQ8IWT0 167 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 GRAMD1CQ8IYS0 662 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 NME8Q8N427 588 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
VARS2-210ENST00000490699 KIAA1468Q9P260 1216 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 SUCLA2Q9P2R7 463 aaPredicted RBP12.11□□□□□ -0.47
VARS2-210ENST00000490699 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 PCDHA2Q9Y5H9 948 aa12.11□□□□□ -0.47
VARS2-210ENST00000490699 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 PLS3P13797 630 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 PHKA2P46019 1235 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
VARS2-210ENST00000490699 DPYDQ12882 1025 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 GIT2Q14161 759 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 KCNB1Q14721 858 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
VARS2-210ENST00000490699 RHPN2Q8IUC4 686 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 TMEM143Q96AN5 459 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 PAWRQ96IZ0 340 aaKnown RBP12.1□□□□□ -0.47
VARS2-210ENST00000490699 C2orf40Q9H1Z8 148 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
VARS2-210ENST00000490699 KMT5AQ9NQR1 393 aa12.1□□□□□ -0.47
VARS2-210ENST00000490699 MYH11P35749 1972 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 NPHP3-ACAD11A0A0J9YXS1 232 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
VARS2-210ENST00000490699 ZBTB42B2RXF5 422 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 K7ENM7 598 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 TREHO43280 583 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 CAND2O75155 1236 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 NAMPTP43490 491 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
VARS2-210ENST00000490699 CLCN3P51790 818 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 EFNA5P52803 228 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 PEX3P56589 373 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
VARS2-210ENST00000490699 STRN3Q13033 797 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 COASYQ13057 564 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 PTK7Q13308 1070 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 BFSP2Q13515 415 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 GDF6Q6KF10 455 aaPredicted RBP12.09□□□□□ -0.47
VARS2-210ENST00000490699 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 LRRC15Q8TF66 581 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms