RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 ATP6V0A4Q9HBG4 840 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
COL2A1-207ENST00000490609 DISC1Q9NRI5 854 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 ZFHX2Q9C0A1 2572 aaPredicted RBP17.6■□□□□ 0.41
COL2A1-207ENST00000490609 CCDC196A0A1B0GTZ2 297 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 TMEM150BA6NC51 233 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 MAGEB2O15479 319 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 CSDE1O75534 798 aaKnown RBP17.59■□□□□ 0.41
COL2A1-207ENST00000490609 PSMD10O75832 226 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 OATP04181 439 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 IFNAR1P17181 557 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 GPC3P51654 580 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 ZXDAP98168 799 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-207ENST00000490609 TRIM67Q6ZTA4 783 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 MICAL1Q8TDZ2 1067 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 MRPS27Q92552 414 aaKnown RBP17.59■□□□□ 0.41
COL2A1-207ENST00000490609 PPP2R3CQ969Q6 453 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 PHF7Q9BWX1 381 aaPredicted RBP17.59■□□□□ 0.41
COL2A1-207ENST00000490609 TMEM117Q9H0C3 514 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 UNC45AQ9H3U1 944 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
COL2A1-207ENST00000490609 DARSP14868 501 aaKnown RBP17.58■□□□□ 0.4
COL2A1-207ENST00000490609 GNA11P29992 359 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 USP11P51784 963 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 PRKCEQ02156 737 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 ODR4Q5SWX8 454 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 SPOUT1Q5T280 376 aaKnown RBP17.58■□□□□ 0.4
COL2A1-207ENST00000490609 PLPP4Q5VZY2 271 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 MCTP2Q6DN12 878 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 KCNT2Q6UVM3 1135 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 THNSL1Q8IYQ7 743 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 PRSS33Q8NF86 280 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 FEZF2Q8TBJ5 459 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 RNF26Q9BY78 433 aaPredicted RBP17.58■□□□□ 0.4
COL2A1-207ENST00000490609 KCNH6Q9H252 994 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 AAASQ9NRG9 546 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 AKT3Q9Y243 479 aa17.58■□□□□ 0.4
COL2A1-207ENST00000490609 IGKV6-21A0A0C4DH24 114 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 TMEM221A6NGB7 291 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 WDR64B1ANS9 1081 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 M0R296 226 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 LAG3P18627 525 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 MRE11P49959 708 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
COL2A1-207ENST00000490609 ANKRD54Q6NXT1 300 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 ASIC4Q96FT7 647 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 RIT2Q99578 217 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 CDCA3Q99618 268 aaPredicted RBP17.57■□□□□ 0.4
COL2A1-207ENST00000490609 SH2D3AQ9BRG2 576 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 SLC26A6Q9BXS9 759 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 NIFKQ9BYG3 293 aaKnown RBP17.57■□□□□ 0.4
COL2A1-207ENST00000490609 CEP131Q9UPN4 1083 aa17.57■□□□□ 0.4
COL2A1-207ENST00000490609 CYP3A7-CYP3A51PA0A087WV96 503 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 CYP3A7P24462 503 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 Q4G0T1 1027 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 PDE12Q6L8Q7 609 aaKnown RBP17.56■□□□□ 0.4
COL2A1-207ENST00000490609 SLC39A11Q8N1S5 342 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 CCDC12Q8WUD4 166 aaPredicted RBP17.56■□□□□ 0.4
COL2A1-207ENST00000490609 RPGRIP1Q96KN7 1286 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 FAM167AQ96KS9 214 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 MBOAT7Q96N66 472 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 AIFM3Q96NN9 605 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 TCF25Q9BQ70 676 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 SAMM50Q9Y512 469 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 C2orf16Q68DN1 1984 aa17.56■□□□□ 0.4
COL2A1-207ENST00000490609 SPTBN4Q9H254 2564 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 DENND4AQ7Z401 1863 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 MEIS3P2A8K0S8 358 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 CHMP2AO43633 222 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 TDP2O95551 362 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 FGD1P98174 961 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 TMEM173Q86WV6 379 aaPredicted RBP17.55■□□□□ 0.4
COL2A1-207ENST00000490609 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 HELQQ8TDG4 1101 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 TBCKQ8TEA7 893 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 MFSD14AQ96MC6 490 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 LARP6Q9BRS8 491 aaKnown RBP17.55■□□□□ 0.4
COL2A1-207ENST00000490609 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 SH3GLB2Q9NR46 395 aa17.55■□□□□ 0.4
COL2A1-207ENST00000490609 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
COL2A1-207ENST00000490609 ARID2Q68CP9 1835 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 C2orf71A6NGG8 1288 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 NT5C1B-RDH14C9J2C7 533 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 B4GALT3O60512 393 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 TECP42680 631 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 TCF15Q12870 199 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 LRCH2Q5VUJ6 765 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 LLGL2Q6P1M3 1020 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 MRPL43Q8N983 215 aaKnown RBP17.54■□□□□ 0.4
COL2A1-207ENST00000490609 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 PBXIP1Q96AQ6 731 aa17.54■□□□□ 0.4
COL2A1-207ENST00000490609 MAP7D2Q96T17 732 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms