RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 CCSER1Q9C0I3 900 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 ATP6V0A4Q9HBG4 840 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 GPRC5CQ9NQ84 441 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 RCOR1Q9UKL0 485 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 CFAP45Q9UL16 551 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
SRGAP3-208ENST00000490348 A0A087X0B3 334 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 A0A1W2PPC1 479 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 M0QZ92 97 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 PLCG1P19174 1290 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 CD52P31358 61 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 CRYBB1P53674 252 aaPredicted RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 NUCB2P80303 420 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 FAM109BQ6ICB4 259 aaPredicted RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 CNKSR3Q6P9H4 555 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 TSHZ1Q6ZSZ6 1077 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 RHPN2Q8IUC4 686 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 BLOC1S4Q9NUP1 217 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 NOC2LQ9Y3T9 749 aaKnown RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 SLC26A4O43511 780 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 GAS2O43903 313 aaKnown RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 CYP11B2P19099 503 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 ARL2P36404 184 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 DNM2P50570 870 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 SLC12A3P55017 1021 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 LAMTOR4Q0VGL1 99 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 SHC4Q6S5L8 630 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 KCNG4Q8TDN1 519 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 ASAP3Q8TDY4 903 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 PSPC1Q8WXF1 523 aaKnown RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
SRGAP3-208ENST00000490348 RUSC1Q9BVN2 902 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 POLD4Q9HCU8 107 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 PCDHA7Q9UN72 937 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 COL4A3BPQ9Y5P4 624 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 SQORQ9Y6N5 450 aa16■□□□□ 0.15
SRGAP3-208ENST00000490348 EYSQ5T1H1 3165 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 TCHHQ07283 1943 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 A0A087WZ62 844 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 CSDE1O75534 798 aaKnown RBP15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 NAALADL2Q58DX5 795 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 FAM228AQ86W67 206 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 NLRP7Q8WX94 980 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 FDXACB1Q9BRP7 624 aaPredicted RBP15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 PADI3Q9ULW8 664 aa15.99■□□□□ 0.15
SRGAP3-208ENST00000490348 PLA2G4BP0C869 781 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 DARSP14868 501 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 GLRA2P23416 452 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 EIF4BP23588 611 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 WDR5P61964 334 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 KRT85P78386 507 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 RINT1Q6NUQ1 792 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 C1orf186Q6ZWK4 172 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 DAW1Q8N136 415 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 SYT2Q8N9I0 419 aaPredicted RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 USP38Q8NB14 1042 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 TCP11Q8WWU5 503 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 BSNDQ8WZ55 320 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 SEPT8Q92599 483 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 CALML4Q96GE6 196 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 CDK5RAP3Q96JB5 506 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 POLR3FQ9H1D9 316 aaPredicted RBP15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 ERVK-5Q9HDB9 667 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
SRGAP3-208ENST00000490348 TRANK1O15050 2925 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 SOX1O00570 391 aaPredicted RBP15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 CUTAO60888 179 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 BAIAP3O94812 1187 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 SRGAP2CP0DJJ0 459 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 FGFR4P22455 802 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 ME1P48163 572 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 DEFB103AP81534 67 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 PAK2Q13177 524 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 CAPSQ13938 189 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 LRIT3Q3SXY7 679 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 FAM102BQ5T8I3 360 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 TMCO2Q7Z6W1 182 aaPredicted RBP15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 ZNF410Q86VK4 478 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 ZNF710Q8N1W2 664 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 MCPH1Q8NEM0 835 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 RAD54LQ92698 747 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 MINDY3Q9H8M7 445 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 GDPD2Q9HCC8 539 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms