RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 HPSEQ9Y251 543 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 LOXHD1Q8IVV2 1947 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 H0YGN5 161 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 NDUFA8P51970 172 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 NLRP11P59045 1033 aaKnown RBP18.59■□□□□ 0.57
SFXN5-220ENST00000490056 MDM2Q00987 491 aaPredicted RBP18.59■□□□□ 0.57
SFXN5-220ENST00000490056 MGAT3Q09327 533 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 MBTPS1Q14703 1052 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 FAM26DQ5JW98 314 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 FAM102BQ5T8I3 360 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 IER5Q5VY09 327 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 MFSD5Q6N075 450 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 CLEC17AQ6ZS10 378 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 RHPN2Q8IUC4 686 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 PRPF31Q8WWY3 499 aaKnown RBP18.59■□□□□ 0.57
SFXN5-220ENST00000490056 MRPS27Q92552 414 aaKnown RBP18.59■□□□□ 0.57
SFXN5-220ENST00000490056 POLR3FQ9H1D9 316 aaPredicted RBP18.59■□□□□ 0.57
SFXN5-220ENST00000490056 GINS2Q9Y248 185 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
SFXN5-220ENST00000490056 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.57
SFXN5-220ENST00000490056 TNRC18O15417 2968 aaPredicted RBP18.58■□□□□ 0.57
SFXN5-220ENST00000490056 GAS2O43903 313 aaKnown RBP18.58■□□□□ 0.56
SFXN5-220ENST00000490056 CAND2O75155 1236 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 GPR32O75388 356 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 CSF2RAP15509 400 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 ARL2P36404 184 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
SFXN5-220ENST00000490056 GPNMBQ14956 572 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 SV2BQ7L1I2 683 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 IQUBQ8NA54 791 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 TMEM87AQ8NBN3 555 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 MCPH1Q8NEM0 835 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 ASAP3Q8TDY4 903 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 TCP11Q8WWU5 503 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 PSPC1Q8WXF1 523 aaKnown RBP18.58■□□□□ 0.56
SFXN5-220ENST00000490056 STAMQ92783 540 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 CELF4Q9BZC1 486 aaKnown RBP18.58■□□□□ 0.56
SFXN5-220ENST00000490056 ADAMTS10Q9H324 1103 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 SERTAD1Q9UHV2 236 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 TRPV2Q9Y5S1 764 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 LTBP2Q14767 1821 aa18.58■□□□□ 0.56
SFXN5-220ENST00000490056 CEP290O15078 2479 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 FAM237AA0A1B0GTK4 181 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 M0QZ92 97 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 NBNO60934 754 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 HIP1RO75146 1068 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 PRPF40AO75400 957 aaKnown RBP18.57■□□□□ 0.56
SFXN5-220ENST00000490056 RPLP2P05387 115 aaKnown RBP18.57■□□□□ 0.56
SFXN5-220ENST00000490056 GPC3P51654 580 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 LAMTOR4Q0VGL1 99 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 MAPK7Q13164 816 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 DEFB128Q7Z7B8 93 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 DAW1Q8N136 415 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 NLRP4Q96MN2 994 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 COL4A3BPQ9Y5P4 624 aa18.57■□□□□ 0.56
SFXN5-220ENST00000490056 SIP14410 1827 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 A0A087WZ62 844 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
SFXN5-220ENST00000490056 MYMKA6NI61 221 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 SFI1A8K8P3 1242 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 SRGAP2CP0DJJ0 459 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 GHRP10912 638 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 GLRA2P23416 452 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 GUCY2CP25092 1073 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 MAGEA10P43363 369 aaPredicted RBP18.56■□□□□ 0.56
SFXN5-220ENST00000490056 SYKP43405 635 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 LONRF3Q496Y0 759 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 TMEM199Q8N511 208 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 NLRP7Q8WX94 980 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 BSNDQ8WZ55 320 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 VWCEQ96DN2 955 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 SCLT1Q96NL6 688 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 OSMRQ99650 979 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 LBHD1Q9BQE6 289 aaPredicted RBP18.56■□□□□ 0.56
SFXN5-220ENST00000490056 FDXACB1Q9BRP7 624 aaPredicted RBP18.56■□□□□ 0.56
SFXN5-220ENST00000490056 TANC1Q9C0D5 1861 aa18.56■□□□□ 0.56
SFXN5-220ENST00000490056 ACTN4O43707 911 aaKnown RBP18.55■□□□□ 0.56
SFXN5-220ENST00000490056 CSDE1O75534 798 aaKnown RBP18.55■□□□□ 0.56
SFXN5-220ENST00000490056 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
SFXN5-220ENST00000490056 ACRP10323 421 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 CRYBB1P53674 252 aaPredicted RBP18.55■□□□□ 0.56
SFXN5-220ENST00000490056 EPHB4P54760 987 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 FPGSQ05932 587 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 GIT2Q14161 759 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 FBXO47Q5MNV8 452 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 DYMQ7RTS9 669 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 GRAMD1CQ8IYS0 662 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 TMEM40Q8WWA1 233 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 REEP2Q9BRK0 252 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 CUEDC2Q9H467 287 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 TET1Q8NFU7 2136 aa18.55■□□□□ 0.56
SFXN5-220ENST00000490056 ASAP2O43150 1006 aa18.54■□□□□ 0.56
SFXN5-220ENST00000490056 ZNF202O95125 648 aa18.54■□□□□ 0.56
SFXN5-220ENST00000490056 SLFN14P0C7P3 912 aa18.54■□□□□ 0.56
SFXN5-220ENST00000490056 LIG1P18858 919 aa18.54■□□□□ 0.56
SFXN5-220ENST00000490056 AFMP43652 599 aa18.54■□□□□ 0.56
SFXN5-220ENST00000490056 CAPSQ13938 189 aa18.54■□□□□ 0.56
SFXN5-220ENST00000490056 MXD4Q14582 209 aaPredicted RBP18.54■□□□□ 0.56
SFXN5-220ENST00000490056 LPIN1Q14693 890 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms