RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LSG1Q9H089 658 aaKnown RBP15.85■□□□□ 0.13
VARS-227ENST00000489979 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 WDR81Q562E7 1941 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 PRR23AA6NEV1 266 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 IPO5O00410 1097 aaKnown RBP15.84■□□□□ 0.13
VARS-227ENST00000489979 ASGR2P07307 311 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 CA8P35219 290 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 MTHFRP42898 656 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 CLK2P49760 499 aaKnown RBP15.84■□□□□ 0.13
VARS-227ENST00000489979 CLLU1OSQ5K130 101 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 RARS2Q5T160 578 aaKnown RBP15.84■□□□□ 0.13
VARS-227ENST00000489979 JAKMIP3Q5VZ66 844 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 CREB3L3Q68CJ9 461 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
VARS-227ENST00000489979 MAFBQ9Y5Q3 323 aaPredicted RBP15.84■□□□□ 0.13
VARS-227ENST00000489979 V9GY48 417 aaPredicted RBP15.84■□□□□ 0.13
VARS-227ENST00000489979 VPS13AQ96RL7 3174 aa15.84■□□□□ 0.13
VARS-227ENST00000489979 IGLV3-22A0A075B6J6 115 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 EIF4BP23588 611 aaKnown RBP15.83■□□□□ 0.12
VARS-227ENST00000489979 NBL1P41271 181 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 METAP2P50579 478 aaKnown RBP eCLIP15.83■□□□□ 0.127e-10■■■□□ 18.8
VARS-227ENST00000489979 FOXK2Q01167 660 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 FUT2Q10981 343 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 RTN1Q16799 776 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 ASTLQ6HA08 431 aaPredicted RBP15.83■□□□□ 0.12
VARS-227ENST00000489979 EFCAB12Q6NXP0 572 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 APOA5Q6Q788 366 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 LRRC71Q8N4P6 559 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 C12orf76Q8N812 135 aaPredicted RBP15.83■□□□□ 0.12
VARS-227ENST00000489979 HELQQ8TDG4 1101 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 ZNF668Q96K58 619 aaPredicted RBP15.83■□□□□ 0.12
VARS-227ENST00000489979 MAP7D2Q96T17 732 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 ZNF577Q9BSK1 485 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 ADAMTS10Q9H324 1103 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 BARHL2Q9NY43 387 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 LIMD1Q9UGP4 676 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 CEP131Q9UPN4 1083 aa15.83■□□□□ 0.12
VARS-227ENST00000489979 NT5C1B-RDH14C9J2C7 533 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 hCG_1984214I3L0E3 225 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 MAGEB2O15479 319 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 CXCL14O95715 111 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 PSAPP07602 524 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 ZNF746Q6NUN9 644 aaPredicted RBP15.82■□□□□ 0.12
VARS-227ENST00000489979 KANK3Q6NY19 840 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 LINC01465Q8N7H1 131 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 ZNF713Q8N859 430 aaPredicted RBP15.82■□□□□ 0.12
VARS-227ENST00000489979 TDRD5Q8NAT2 981 aaKnown RBP15.82■□□□□ 0.12
VARS-227ENST00000489979 TBC1D22BQ9NU19 505 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 GABBR1Q9UBS5 961 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 PCDHA10Q9Y5I2 948 aa15.82■□□□□ 0.12
VARS-227ENST00000489979 A0A0U1RQF3 1178 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 CYP3A4P08684 503 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 FGFR4P22455 802 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 TMOD1P28289 359 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 BCAR1P56945 870 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 BMS1Q14692 1282 aaKnown RBP15.81■□□□□ 0.12
VARS-227ENST00000489979 NECTIN1Q15223 517 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 KIAA1841Q6NSI8 718 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 ZNF598Q86UK7 904 aaKnown RBP15.81■□□□□ 0.12
VARS-227ENST00000489979 SMAP1Q8IYB5 467 aaPredicted RBP15.81■□□□□ 0.12
VARS-227ENST00000489979 ZDHHC14Q8IZN3 488 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 CRYGNQ8WXF5 182 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 AUTS2Q8WXX7 1259 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 TMEM169Q96HH4 297 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 MFSD1Q9H3U5 465 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 TCEAL9Q9UHQ7 104 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 DBR1Q9UK59 544 aaKnown RBP15.81■□□□□ 0.12
VARS-227ENST00000489979 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
VARS-227ENST00000489979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.8■□□□□ 0.12
VARS-227ENST00000489979 ZBTB43O43298 467 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 EOMESO95936 686 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 EPCAMP16422 314 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 ALDH7A1P49419 539 aaKnown RBP15.8■□□□□ 0.12
VARS-227ENST00000489979 GPC3P51654 580 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 SETQ01105 290 aaPredicted RBP15.8■□□□□ 0.12
VARS-227ENST00000489979 ATAT1Q5SQI0 421 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 FRMD5Q7Z6J6 570 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 VPS52Q8N1B4 723 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 ZNF710Q8N1W2 664 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 FAM167AQ96KS9 214 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 TCEANC2Q96MN5 208 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 SCLT1Q96NL6 688 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 MRPL9Q9BYD2 267 aaKnown RBP15.8■□□□□ 0.12
VARS-227ENST00000489979 ZBP1Q9H171 429 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 DZANK1Q9NVP4 752 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 SAMM50Q9Y512 469 aa15.8■□□□□ 0.12
VARS-227ENST00000489979 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 DARSP14868 501 aaKnown RBP15.79■□□□□ 0.12
VARS-227ENST00000489979 CLCN5P51795 746 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 MCTP2Q6DN12 878 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 TMEM173Q86WV6 379 aaPredicted RBP15.79■□□□□ 0.12
VARS-227ENST00000489979 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 FEZF2Q8TBJ5 459 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
VARS-227ENST00000489979 ESYT1Q9BSJ8 1104 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 DCHS1Q96JQ0 3298 aa15.79■□□□□ 0.12
VARS-227ENST00000489979 DENND4AQ7Z401 1863 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms