RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FGFR4P22455 802 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 NLRP11P59045 1033 aaKnown RBP13.31□□□□□ -0.28
SRSF4-204ENST00000489898 LEXMQ3ZCV2 418 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 PAN2Q504Q3 1202 aaKnown RBP13.31□□□□□ -0.28
SRSF4-204ENST00000489898 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
SRSF4-204ENST00000489898 MIER3Q7Z3K6 550 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 VN1R2Q8NFZ6 395 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 SPPL3Q8TCT6 385 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
SRSF4-204ENST00000489898 IFT122Q9HBG6 1241 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 SEPT9Q9UHD8 586 aaPredicted RBP13.31□□□□□ -0.28
SRSF4-204ENST00000489898 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 VPS13AQ96RL7 3174 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 TECTAO75443 2155 aa13.31□□□□□ -0.28
SRSF4-204ENST00000489898 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 BTBD18B2RXH4 712 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 ZBTB39O15060 712 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 TBX3O15119 743 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 MAGEB2O15479 319 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 LINC01565O15544 149 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 CSDE1O75534 798 aaKnown RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 CDKL5O76039 1030 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 NPEPPSP55786 919 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 KCNC3Q14003 757 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 CASD1Q96PB1 797 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 MTMR9Q96QG7 549 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 LMAN2LQ9H0V9 348 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
SRSF4-204ENST00000489898 TMEM161AQ9NX61 479 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 GINS2Q9Y248 185 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 SAMM50Q9Y512 469 aa13.3□□□□□ -0.28
SRSF4-204ENST00000489898 M0QZ92 97 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 FSCN2O14926 492 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 CD2BP2O95400 341 aaKnown RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 KCNA5P22460 613 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 NEK4P51957 841 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 NFX1Q12986 1120 aaKnown RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 TMEM173Q86WV6 379 aaPredicted RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 CKAP2LQ8IYA6 745 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 DIS3L2Q8IYB7 885 aaKnown RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 MSLNLQ96KJ4 702 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 LXNQ9BS40 222 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 ELAC1Q9H777 363 aaKnown RBP13.29□□□□□ -0.28
SRSF4-204ENST00000489898 C1orf112Q9NSG2 853 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 RGL1Q9NZL6 768 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 ANK1P16157 1881 aa13.29□□□□□ -0.28
SRSF4-204ENST00000489898 CCDC194A0A1B0GVG4 234 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 H3BQ06 376 aaPredicted RBP13.28□□□□□ -0.28
SRSF4-204ENST00000489898 KRT2P35908 639 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 PSMC5P62195 406 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
SRSF4-204ENST00000489898 TBC1D8BQ0IIM8 1120 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 ANKRD1Q15327 319 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 SKIV2LQ15477 1246 aaKnown RBP13.28□□□□□ -0.28
SRSF4-204ENST00000489898 CPLX2Q6PUV4 134 aaKnown RBP13.28□□□□□ -0.28
SRSF4-204ENST00000489898 ECHDC2Q86YB7 292 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 HSD17B14Q9BPX1 270 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 TRAIPQ9BWF2 469 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 CLEC1BQ9P126 229 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 AKT3Q9Y243 479 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 RWDD3Q9Y3V2 267 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 DOCK8Q8NF50 2099 aa13.28□□□□□ -0.28
SRSF4-204ENST00000489898 TSC2P49815 1807 aa13.27□□□□□ -0.28
SRSF4-204ENST00000489898 CITO14578 2027 aa13.27□□□□□ -0.28
SRSF4-204ENST00000489898 A0A087WZ62 844 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 GPR182O15218 404 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 CCNT1O60563 726 aaKnown RBP13.27□□□□□ -0.29
SRSF4-204ENST00000489898 LYPLA2O95372 231 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 PBX3P40426 434 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 QARSP47897 775 aaKnown RBP13.27□□□□□ -0.29
SRSF4-204ENST00000489898 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.29
SRSF4-204ENST00000489898 FOSBP53539 338 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 UBXN11Q5T124 520 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 FAM43BQ6ZT52 329 aaPredicted RBP13.27□□□□□ -0.29
SRSF4-204ENST00000489898 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 C4orf19Q8IY42 314 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 COLGALT1Q8NBJ5 622 aa13.27□□□□□ -0.29
SRSF4-204ENST00000489898 BCL7CQ8WUZ0 217 aaPredicted RBP13.27□□□□□ -0.29
SRSF4-204ENST00000489898 DYDC2Q96IM9 177 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms