RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TIGD7Q6NT04 549 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-206ENST00000489868 CXorf67Q86X51 503 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-206ENST00000489868 NKD2Q969F2 451 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-206ENST00000489868 SCYL1Q96KG9 808 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 DENND2AQ9ULE3 1009 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 PPP2R3BQ9Y5P8 575 aa7.36□□□□□ -1.23
CCDC39-206ENST00000489868 ZNF536O15090 1300 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 A0A0A6YYJ9 748 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 A0A0A6YYK5 440 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-206ENST00000489868 PRSS38A1L453 326 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 GPR42O15529 346 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 KDM1AO60341 852 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 BCAR1P56945 870 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 NFKB2Q00653 900 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 HGFACQ04756 655 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 ADAM15Q13444 863 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 DGKDQ16760 1214 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 BMP8AQ7Z5Y6 402 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 LYSMD2Q8IV50 215 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 RTKN2Q8IZC4 609 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 GNRHR2Q96P88 292 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 SOX7Q9BT81 388 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 TOPORSQ9NS56 1045 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-206ENST00000489868 USP36Q9P275 1121 aaKnown RBP7.35□□□□□ -1.23
CCDC39-206ENST00000489868 SAE1Q9UBE0 346 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-206ENST00000489868 TMPRSS11EQ9UL52 423 aa7.35□□□□□ -1.23
CCDC39-206ENST00000489868 APOBEC2Q9Y235 224 aaKnown RBP7.35□□□□□ -1.23
CCDC39-206ENST00000489868 DNAJC6O75061 913 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 PCDH8O95206 1070 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 PFKMP08237 780 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 CELA3BP08861 270 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 CLEC2LP0C7M8 214 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 SYN1P17600 705 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 MANFP55145 182 aaKnown RBP7.34□□□□□ -1.23
CCDC39-206ENST00000489868 NFYCQ13952 458 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 ACAP1Q15027 740 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 SURF1Q15526 300 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 ESPNLQ6ZVH7 1005 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 HDGFL2Q7Z4V5 671 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-206ENST00000489868 RASSF3Q86WH2 238 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 CMIPQ8IY22 773 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 OR14K1Q8NGZ2 314 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 NEIL1Q96FI4 390 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-206ENST00000489868 DYDC2Q96IM9 177 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 LRRC37BQ96QE4 947 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 OR10A2Q9H208 303 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 SPC25Q9HBM1 224 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 DNAI1Q9UI46 699 aa7.34□□□□□ -1.23
CCDC39-206ENST00000489868 CTDP1Q9Y5B0 961 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-206ENST00000489868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-206ENST00000489868 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 BRINP1O60477 761 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 MEOX1P50221 254 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 TMPRSS15P98073 1019 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 PLP2Q04941 152 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 ZMAT1Q5H9K5 638 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 SLFN13Q68D06 897 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 FRMD7Q6ZUT3 714 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 USP30Q70CQ3 517 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 RPGRQ92834 1020 aaKnown RBP7.33□□□□□ -1.24
CCDC39-206ENST00000489868 LMF1Q96S06 567 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 DPYSL5Q9BPU6 564 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 ANO3Q9BYT9 981 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 JADE2Q9NQC1 790 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 FAM184BQ9ULE4 1060 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 NR2E1Q9Y466 385 aa7.33□□□□□ -1.24
CCDC39-206ENST00000489868 MYPNQ86TC9 1320 aa7.32□□□□□ -1.24
CCDC39-206ENST00000489868 C2orf78A6NCI8 922 aa7.32□□□□□ -1.24
CCDC39-206ENST00000489868 GPR39O43194 453 aa7.32□□□□□ -1.24
CCDC39-206ENST00000489868 HNRNPLP14866 589 aaKnown RBP eCLIP7.32□□□□□ -1.24
CCDC39-206ENST00000489868 DUSP8Q13202 625 aa7.32□□□□□ -1.24
CCDC39-206ENST00000489868 COG1Q8WTW3 980 aa7.32□□□□□ -1.24
CCDC39-206ENST00000489868 SEC61A2Q9H9S3 476 aa7.32□□□□□ -1.24
CCDC39-206ENST00000489868 POLR3BQ9NW08 1133 aaPredicted RBP7.32□□□□□ -1.24
CCDC39-206ENST00000489868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.32□□□□□ -1.24
CCDC39-206ENST00000489868 NOC2LQ9Y3T9 749 aaKnown RBP7.32□□□□□ -1.24
CCDC39-206ENST00000489868 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 NPEPPSL1A6NEC2 478 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 SESN3P58005 492 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 RAC3P60763 192 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 SAFB2Q14151 953 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC39-206ENST00000489868 TRIM25Q14258 630 aaKnown RBP7.31□□□□□ -1.24
CCDC39-206ENST00000489868 PITRM1Q5JRX3 1037 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 KLHDC10Q6PID8 442 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 DDX42Q86XP3 938 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC39-206ENST00000489868 SLC41A1Q8IVJ1 513 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 FERMT2Q96AC1 680 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 FDXACB1Q9BRP7 624 aaPredicted RBP7.31□□□□□ -1.24
CCDC39-206ENST00000489868 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
CCDC39-206ENST00000489868 OAZ3Q9UMX2 235 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 VWA7Q9Y334 891 aa7.31□□□□□ -1.24
CCDC39-206ENST00000489868 RAB11FIP3O75154 756 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 ULK1O75385 1050 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 PRKD3O94806 890 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 AMPD3Q01432 767 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 CCDC62Q6P9F0 684 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 TAX1BP1Q86VP1 789 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 DNERQ8NFT8 737 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 WDR66Q8TBY9 1149 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms