RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
GGA1-222ENST00000489772 MAFAQ8NHW3 353 aaPredicted RBP12.38□□□□□ -0.43
GGA1-222ENST00000489772 LINC01599Q8WXQ3 324 aa12.38□□□□□ -0.43
GGA1-222ENST00000489772 TGS1Q96RS0 853 aaKnown RBP12.38□□□□□ -0.43
GGA1-222ENST00000489772 GCOM2Q9BZD3 368 aaPredicted RBP12.38□□□□□ -0.43
GGA1-222ENST00000489772 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
GGA1-222ENST00000489772 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
GGA1-222ENST00000489772 C1orf112Q9NSG2 853 aa12.38□□□□□ -0.43
GGA1-222ENST00000489772 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
GGA1-222ENST00000489772 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
GGA1-222ENST00000489772 PCDHB6Q9Y5E3 794 aa12.38□□□□□ -0.43
GGA1-222ENST00000489772 COL6A3P12111 3177 aa12.38□□□□□ -0.43
GGA1-222ENST00000489772 ZBTB39O15060 712 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
GGA1-222ENST00000489772 STAG3L1P0CL83 205 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 XRCC6P12956 609 aaKnown RBP eCLIP12.37□□□□□ -0.432e-8■■■■■ 34.8
GGA1-222ENST00000489772 PTGDRQ13258 359 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 HAUS3Q68CZ6 603 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 SLC24A5Q71RS6 500 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 TCP11Q8WWU5 503 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 PSPC1Q8WXF1 523 aaKnown RBP12.37□□□□□ -0.43
GGA1-222ENST00000489772 INTS4Q96HW7 963 aaKnown RBP12.37□□□□□ -0.43
GGA1-222ENST00000489772 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
GGA1-222ENST00000489772 NLRP4Q96MN2 994 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 ADAM2Q99965 735 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 POLR3CQ9BUI4 534 aaPredicted RBP12.37□□□□□ -0.43
GGA1-222ENST00000489772 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
GGA1-222ENST00000489772 TUFT1Q9NNX1 390 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 RGS18Q9NS28 235 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 KAT6AQ92794 2004 aa12.37□□□□□ -0.43
GGA1-222ENST00000489772 A0A087WZ62 844 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 DGAT1O75907 488 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 SFPQP23246 707 aaKnown RBP eCLIP12.36□□□□□ -0.43
GGA1-222ENST00000489772 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 CLCN6P51797 869 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 ERVK-21P61565 698 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 ADGRE1Q14246 886 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 PDIA5Q14554 519 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 EMC2Q15006 297 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 PRPF31Q8WWY3 499 aaKnown RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 MTRQ99707 1265 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
GGA1-222ENST00000489772 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 PCDHB7Q9Y5E2 793 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
GGA1-222ENST00000489772 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 RFXAPO00287 272 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 ASAP2O43150 1006 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
GGA1-222ENST00000489772 MGEA5O60502 916 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 MED24O75448 989 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 DGKIO75912 1065 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 IBSPP21815 317 aaPredicted RBP12.35□□□□□ -0.43
GGA1-222ENST00000489772 RPA1P27694 616 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 PRPHP41219 470 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 RARRES1P49788 294 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 BTG3Q14201 252 aaPredicted RBP12.35□□□□□ -0.43
GGA1-222ENST00000489772 BRAPQ7Z569 592 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 ATP6V0A4Q9HBG4 840 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 ADGRA3Q8IWK6 1321 aa12.35□□□□□ -0.43
GGA1-222ENST00000489772 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
GGA1-222ENST00000489772 SRGAP2CP0DJJ0 459 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 MUTP22033 750 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
GGA1-222ENST00000489772 LAMTOR4Q0VGL1 99 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 DSC3Q14574 896 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 MXD4Q14582 209 aaPredicted RBP12.34□□□□□ -0.43
GGA1-222ENST00000489772 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 SPRED2Q7Z698 418 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 IGSF22Q8N9C0 903 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 SNX21Q969T3 373 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
GGA1-222ENST00000489772 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 RC3H2Q9HBD1 1191 aaKnown RBP12.34□□□□□ -0.43
GGA1-222ENST00000489772 CHST12Q9NRB3 414 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
GGA1-222ENST00000489772 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
GGA1-222ENST00000489772 RWDD3Q9Y3V2 267 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms