RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 TRPV2Q9Y5S1 764 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 TMEM150BA6NC51 233 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 CHRNA1P02708 482 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 CXCL10P02778 98 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 CYP11B2P19099 503 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 POU5F1BQ06416 359 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 IKBKEQ14164 716 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 TFDP1Q14186 410 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 ECM1Q16610 540 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 RRAGBQ5VZM2 374 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 SEPT8Q92599 483 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 APBB2Q92870 758 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 WNT8BQ93098 351 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 SCLYQ96I15 445 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 EPSTI1Q96J88 318 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 GCOM2Q9BZD3 368 aaPredicted RBP13.83□□□□□ -0.2
COL4A5-206ENST00000489230 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 CDY2AQ9Y6F7 541 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 UMODL1Q5DID0 1318 aa13.83□□□□□ -0.2
COL4A5-206ENST00000489230 ABHD14A-ACY1A0A1B0GW23 586 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 GPR182O15218 404 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 CLCN3P51790 818 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 MGAT3Q09327 533 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 GRB10Q13322 594 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 EMC2Q15006 297 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 PCBP1Q15365 356 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 TMEM119Q4V9L6 283 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 ADALQ6DHV7 355 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 DEFB128Q7Z7B8 93 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 SYT2Q8N9I0 419 aaPredicted RBP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 LEO1Q8WVC0 666 aaPredicted RBP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 PRPF31Q8WWY3 499 aaKnown RBP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 PNMA5Q96PV4 448 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 SH2D3AQ9BRG2 576 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 LRRC27Q9C0I9 530 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
COL4A5-206ENST00000489230 STK17AQ9UEE5 414 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
COL4A5-206ENST00000489230 A0A087WWV3 80 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 E9PMD0 336 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 GPR32O75388 356 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 CTSHP09668 335 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 PLA2G4BP0C869 781 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
COL4A5-206ENST00000489230 GRIN1Q05586 938 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
COL4A5-206ENST00000489230 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
COL4A5-206ENST00000489230 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 TSHZ1Q6ZSZ6 1077 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 RHPN2Q8IUC4 686 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 NLRP7Q8WX94 980 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 KIFAP3Q92845 792 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 ZBTB10Q96DT7 871 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 SCLT1Q96NL6 688 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 ADAMTS10Q9H324 1103 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 CUEDC2Q9H467 287 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 C17orf75Q9HAS0 396 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 COL4A3BPQ9Y5P4 624 aa13.81□□□□□ -0.2
COL4A5-206ENST00000489230 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
COL4A5-206ENST00000489230 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
COL4A5-206ENST00000489230 GOLGA6L4A6NEF3 574 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 NBNO60934 754 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 RPS6KA5O75582 802 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 VTNP04004 478 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 SSBP05455 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL4A5-206ENST00000489230 CMA1P23946 247 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 DNAJB2P25686 324 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 ARL2P36404 184 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 GPC3P51654 580 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 AMPD3Q01432 767 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 TMEM62Q0P6H9 643 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 LAMTOR4Q0VGL1 99 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
COL4A5-206ENST00000489230 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 KIZQ2M2Z5 673 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 PLEKHG4Q58EX7 1191 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 TJAP1Q5JTD0 557 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 SPECC1Q5M775 1068 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 FBXO47Q5MNV8 452 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 TMEM240Q5SV17 173 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
COL4A5-206ENST00000489230 FAM102BQ5T8I3 360 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 RINT1Q6NUQ1 792 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 SV2BQ7L1I2 683 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 C16orf59Q7L2K0 433 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 SRGAP1Q7Z6B7 1085 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 RAD54LQ92698 747 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms