RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZBTB41Q5SVQ8 909 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 RWDD4Q6NW29 188 aaKnown RBP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 TMEM270Q6UE05 265 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 OR6B3Q8NGW1 331 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 CPSF3Q9UKF6 684 aaKnown RBP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 HEY1Q9Y5J3 304 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 MYO5CQ9NQX4 1742 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 ZRANB2O95218 330 aaKnown RBP eCLIP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 NCAPGQ9BPX3 1015 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 ZNF341Q9BYN7 854 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 POTEFA5A3E0 1075 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 KRT37O76014 449 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 POTEIP0CG38 1075 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 POTEGQ6S5H5 508 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 POTEEQ6S8J3 1075 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 ZNF564Q8TBZ8 553 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 ABCB11O95342 1321 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 MIF4GDA9UHW6 222 aaKnown RBP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 KIF19Q2TAC6 998 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 PROM2Q8N271 834 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 TRIML2Q8N7C3 387 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 RMDN2Q96LZ7 410 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 ABI1Q8IZP0 508 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 FAM213AQ9BRX8 229 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 IRX2Q9BZI1 471 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-209ENST00000489180 KLC2Q9H0B6 622 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 TMEM60Q9H2L4 133 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 SLC4A7Q9Y6M7 1214 aa18.84■□□□□ 0.61
NPHP4-209ENST00000489180 CTIFO43310 598 aaKnown RBP18.83■□□□□ 0.61
NPHP4-209ENST00000489180 PADI6Q6TGC4 694 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 ST13P4Q8IZP2 240 aaPredicted RBP18.83■□□□□ 0.61
NPHP4-209ENST00000489180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.61
NPHP4-209ENST00000489180 ZNF185O15231 689 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 XPAP23025 273 aaPredicted RBP18.83■□□□□ 0.61
NPHP4-209ENST00000489180 GUCY1A2P33402 732 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 SOX5P35711 763 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 PRELPP51888 382 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 EP400NLQ6ZTU2 488 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 FAM167BQ9BTA0 163 aa18.83■□□□□ 0.61
NPHP4-209ENST00000489180 NOC2LQ9Y3T9 749 aaKnown RBP18.83■□□□□ 0.61
NPHP4-209ENST00000489180 HOXA7P31268 230 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-209ENST00000489180 DRAP1Q14919 205 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-209ENST00000489180 AP3B2Q13367 1082 aa18.83■□□□□ 0.6
NPHP4-209ENST00000489180 PDCD2Q16342 344 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-209ENST00000489180 TGS1Q96RS0 853 aaKnown RBP18.83■□□□□ 0.6
NPHP4-209ENST00000489180 TSC22D3Q99576 134 aa18.83■□□□□ 0.6
NPHP4-209ENST00000489180 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.62e-7■■■■□ 21.2
NPHP4-209ENST00000489180 INTS2Q9H0H0 1204 aaKnown RBP18.83■□□□□ 0.6
NPHP4-209ENST00000489180 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.83■□□□□ 0.6
NPHP4-209ENST00000489180 SUDS3Q9H7L9 328 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-209ENST00000489180 ECT2Q9H8V3 914 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 RPAP1Q9BWH6 1393 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-209ENST00000489180 FAM160B2Q86V87 743 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 XXYLT1Q8NBI6 393 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 PARD3BQ8TEW8 1205 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 SLC12A6Q9UHW9 1150 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 MORC2Q9Y6X9 1032 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-209ENST00000489180 SAMD9LQ8IVG5 1584 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 OSBPP22059 807 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 PMLP29590 882 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 ABCD1P33897 745 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 GUCY1A3Q02108 690 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 MTMR1Q13613 665 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 KNOP1Q1ED39 458 aaKnown RBP18.82■□□□□ 0.6
NPHP4-209ENST00000489180 RBM41Q96IZ5 413 aaKnown RBP18.82■□□□□ 0.6
NPHP4-209ENST00000489180 BAG6P46379 1132 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 VSNL1P62760 191 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 RGS9BPQ6ZS82 235 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 ALKBH8Q96BT7 664 aaKnown RBP18.82■□□□□ 0.6
NPHP4-209ENST00000489180 CENPKQ9BS16 269 aa18.82■□□□□ 0.6
NPHP4-209ENST00000489180 FTLP02792 175 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 EEF1DP29692 281 aaKnown RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 NOP14P78316 857 aaKnown RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 ZNF667Q5HYK9 610 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 SLFN12LQ6IEE8 588 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 ATP6V1G3Q96LB4 118 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 YIPF3Q9GZM5 350 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 VPS11Q9H270 941 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 TAF1DQ9H5J8 278 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 FGFR1OP2Q9NVK5 253 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 PCSK1NQ9UHG2 260 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 FBXL5Q9UKA1 691 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 APOBEC2Q9Y235 224 aaKnown RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 TYW5A2RUC4 315 aaKnown RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 DNAJC8O75937 253 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 MDM2Q00987 491 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 C1orf146Q5VVC0 180 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 TMC4Q7Z404 712 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 WDR75Q8IWA0 830 aaKnown RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 AP5M1Q9H0R1 490 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 SLC24A3Q9HC58 644 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 PVALEFA0A1B0GWK0 134 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 KRT10P13645 584 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 BRAFP15056 766 aa18.81■□□□□ 0.6
NPHP4-209ENST00000489180 MKRN3Q13064 507 aaKnown RBP18.81■□□□□ 0.6
NPHP4-209ENST00000489180 DPY19L2Q6NUT2 758 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms