RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 LRRC8CQ8TDW0 803 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 C18orf8Q96DM3 657 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 DAAM1Q9Y4D1 1078 aa17.46■□□□□ 0.39
MCF2L-229ENST00000488765 BZW2Q9Y6E2 419 aaKnown RBP17.46■□□□□ 0.39
MCF2L-229ENST00000488765 KRT36O76013 467 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 PDE8BO95263 885 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 STX2P32856 288 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 SLC18A3Q16572 532 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 CCDC84Q86UT8 332 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 CENPTQ96BT3 561 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 RNF26Q9BY78 433 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 A6NJR5 290 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 TMEM110-MUSTN1A8MSY1 372 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 FLOT1O75955 427 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 ZSCAN29Q8IWY8 852 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 ATL2Q8NHH9 583 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 POP1Q99575 1024 aaKnown RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 DCCP43146 1447 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 PDE8AO60658 829 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 ZNF189O75820 626 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 CYP1A1P04798 512 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 KCNJ1P48048 391 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 USP11P51784 963 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 DNAJC3Q13217 504 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 AUHQ13825 339 aaKnown RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 PDIA5Q14554 519 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 LRRC36Q1X8D7 754 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
MCF2L-229ENST00000488765 DSTYKQ6XUX3 929 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 NRG4Q8WWG1 115 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 PWWP2AQ96N64 755 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 ATP6V0A2Q9Y487 856 aa17.45■□□□□ 0.38
MCF2L-229ENST00000488765 NOL4O94818 638 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 SERPING1P05155 500 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 FAM200BP0CF97 657 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 GYG1P46976 350 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 NEK3P51956 506 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 MAN2A1Q16706 1144 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 CGB2Q6NT52 195 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 ASAP3Q8TDY4 903 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 NMD3Q96D46 503 aaKnown RBP17.44■□□□□ 0.38
MCF2L-229ENST00000488765 CPVLQ9H3G5 476 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 CUEDC2Q9H467 287 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 SUDS3Q9H7L9 328 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-229ENST00000488765 MFSD4BQ5TF39 518 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 PRUNE1Q86TP1 453 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 ZFAND2BQ8WV99 257 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 BICD1Q96G01 975 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 RBM17Q96I25 401 aaKnown RBP17.44■□□□□ 0.38
MCF2L-229ENST00000488765 PHF12Q96QT6 1004 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 PITPNM3Q9BZ71 974 aa17.44■□□□□ 0.38
MCF2L-229ENST00000488765 IMPDH2P12268 514 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 DIXDC1Q155Q3 683 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 CATIPQ7Z7H3 387 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 CABP7Q86V35 215 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 RAB3IPQ96QF0 476 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 ZHX3Q9H4I2 956 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SEPT11Q9NVA2 429 aaKnown RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SPAG7O75391 227 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 BMP15O95972 392 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SETSIPP0DME0 302 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 CNPY1Q3B7I2 92 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 RBBP8NLQ8NC74 664 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 TNFRSF25Q93038 417 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 LUC7LQ9NQ29 371 aaKnown RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 CAPN9O14815 690 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 EPS15P42566 896 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 EIF3BP55884 814 aaKnown RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 FIGNQ5HY92 759 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SPTY2D1Q68D10 685 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 ZNF571Q7Z3V5 609 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 CARD9Q9H257 536 aa17.43■□□□□ 0.38
MCF2L-229ENST00000488765 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.43■□□□□ 0.38
MCF2L-229ENST00000488765 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 SUPT3HO75486 399 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 VPS41P49754 854 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 LBRQ14739 615 aaKnown RBP17.42■□□□□ 0.38
MCF2L-229ENST00000488765 ALKBH5Q6P6C2 394 aaKnown RBP17.42■□□□□ 0.38
MCF2L-229ENST00000488765 CYTH2Q99418 400 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 KBTBD4Q9NVX7 518 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 RPTORQ8N122 1335 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 MAGEB3O15480 346 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 BRAFP15056 766 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 LONP1P36776 959 aaKnown RBP17.42■□□□□ 0.38
MCF2L-229ENST00000488765 TRIP13Q15645 432 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-229ENST00000488765 GJB7Q6PEY0 223 aa17.42■□□□□ 0.38
MCF2L-229ENST00000488765 GJA10Q969M2 543 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms