RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SH3GL2Q99962 352 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 TRIM51Q9BSJ1 452 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 CAPS2Q9BXY5 557 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 BCCIPQ9P287 314 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 PPP1R9AQ9ULJ8 1098 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 NOC2LQ9Y3T9 749 aaKnown RBP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 GAS7O60861 476 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
CLIC4-202ENST00000488683 TNFRSF8P28908 595 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 USP8P40818 1118 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 SEC24CP53992 1094 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 FKBP1AP62942 108 aaKnown RBP13.81□□□□□ -0.2
CLIC4-202ENST00000488683 EMBQ6PCB8 327 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 LRRC57Q8N9N7 239 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 TPCN2Q8NHX9 752 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 CAVIN3Q969G5 261 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 RNPC3Q96LT9 517 aaKnown RBP13.81□□□□□ -0.2
CLIC4-202ENST00000488683 FIZ1Q96SL8 496 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 GPRC5CQ9NQ84 441 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 CWC15Q9P013 229 aaKnown RBP13.81□□□□□ -0.2
CLIC4-202ENST00000488683 DNAJC12Q9UKB3 198 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 NENFQ9UMX5 172 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 TTI1O43156 1089 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 PPIP5K2O43314 1243 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 PSMD10O75832 226 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 SOX10P56693 466 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 PEX26Q7Z412 305 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 IFT20Q8IY31 132 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 WDR11Q9BZH6 1224 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 OLFML3Q9NRN5 406 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 FZD1Q9UP38 647 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 PLAAQ9Y263 795 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
CLIC4-202ENST00000488683 DAPK3O43293 454 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 BUB1BO60566 1050 aaPredicted RBP13.8□□□□□ -0.2
CLIC4-202ENST00000488683 ZBTB48P10074 688 aaPredicted RBP13.8□□□□□ -0.2
CLIC4-202ENST00000488683 PRKCIP41743 596 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 CFAP58Q5T655 872 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 ZNF577Q9BSK1 485 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 THAP2Q9H0W7 228 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 SART1O43290 800 aaKnown RBP13.8□□□□□ -0.2
CLIC4-202ENST00000488683 ENTPD3O75355 529 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 ECHS1P30084 290 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 GLE1Q53GS7 698 aaKnown RBP13.8□□□□□ -0.2
CLIC4-202ENST00000488683 CEP85LQ5SZL2 805 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 MCTP2Q6DN12 878 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 PHLDB3Q6NSJ2 640 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 PHLDB2Q86SQ0 1253 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 FAM178BQ8IXR5 827 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 BTBD6Q96KE9 485 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 LXNQ9BS40 222 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 GPR88Q9GZN0 384 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 TMEM59LQ9UK28 342 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 TELO2Q9Y4R8 837 aa13.8□□□□□ -0.2
CLIC4-202ENST00000488683 KRIT1O00522 736 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 NFIBO00712 420 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 SLC16A3O15427 465 aaKnown RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 MARCKSL1P49006 195 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 DCAF12L1Q5VU92 463 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 UHMK1Q8TAS1 419 aaKnown RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 COG5Q9UP83 839 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 BTNL10A8MVZ5 291 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 H0YIN7 160 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 FOXN3O00409 490 aaPredicted RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 SHOX2O60902 331 aaPredicted RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 HIP1RO75146 1068 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 IVLP07476 585 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 GCLMP48507 274 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 FMO5P49326 533 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 DAW1Q8N136 415 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 CBWD1Q9BRT8 395 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 PARVGQ9HBI0 331 aa13.79□□□□□ -0.2
CLIC4-202ENST00000488683 METTL14Q9HCE5 456 aaKnown RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 ZNF277Q9NRM2 450 aaPredicted RBP13.79□□□□□ -0.2
CLIC4-202ENST00000488683 F8VZ95 297 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 FGGP02679 453 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 LIG3P49916 1009 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
CLIC4-202ENST00000488683 CC2D2BQ6DHV5 1058 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 GLG1Q92896 1179 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 SLC5A5Q92911 643 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
CLIC4-202ENST00000488683 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 EXOC3O60645 756 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 H2AFZP0C0S5 128 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms