RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ANO5Q75V66 913 aa12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 HAS1Q92839 578 aa12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PABPC5Q96DU9 382 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PLAGL2Q9UPG8 496 aa12.62□□□□□ -0.39
RAB11FIP3-210ENST00000487899 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 FGFR1P11362 822 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 IL9P15248 144 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 EIF4BP23588 611 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■■■□ 24.6
RAB11FIP3-210ENST00000487899 LTBRP36941 435 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 XKR3Q5GH77 459 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ADGRD2Q7Z7M1 963 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 KLHL23Q8NBE8 558 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 CD320Q9NPF0 282 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 TMEM161AQ9NX61 479 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
RAB11FIP3-210ENST00000487899 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PLXNA3P51805 1871 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 TBX3O15119 743 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 CCNT1O60563 726 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 XBP1P17861 261 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 FGFR4P22455 802 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 TMOD1P28289 359 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 IRS1P35568 1242 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 KRT2P35908 639 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 FAM189BP81408 668 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 DLX2Q07687 328 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 NAALADL2Q58DX5 795 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 SPPL3Q8TCT6 385 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 FAM20AQ96MK3 541 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 CWH43Q9H720 699 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PCDHB7Q9Y5E2 793 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PCDHGC5Q9Y5F6 944 aa12.6□□□□□ -0.39
RAB11FIP3-210ENST00000487899 GRXCR2A6NFK2 248 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 TBKBP1A7MCY6 615 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 LINC01565O15544 149 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 MAFO75444 373 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 CSDE1O75534 798 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 NEK4P51957 841 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 PSMC5P62195 406 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 CLLU1OSQ5K130 101 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ZNF710Q8N1W2 664 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 WASF1Q92558 559 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 LXNQ9BS40 222 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 CLDND1Q9NY35 253 aa12.59□□□□□ -0.39
RAB11FIP3-210ENST00000487899 GLP2RO95838 553 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 QARSP47897 775 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 FOSBP53539 338 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 NPEPPSP55786 919 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ECHDC2Q86YB7 292 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 KSR1Q8IVT5 923 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 FAM178BQ8IXR5 827 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 DIS3L2Q8IYB7 885 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 COLGALT1Q8NBJ5 622 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 POF1BQ8WVV4 589 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 SCLT1Q96NL6 688 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CASD1Q96PB1 797 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 KIF2CQ99661 725 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 DHX33Q9H6R0 707 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CYP26B1Q9NR63 512 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 MYH11P35749 1972 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
RAB11FIP3-210ENST00000487899 KMT2EQ8IZD2 1858 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 A0A087WZ62 844 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 BTBD18B2RXH4 712 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 PBX3P40426 434 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CYP4A11Q02928 519 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 NCAPH2Q6IBW4 605 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ZNF410Q86VK4 478 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 RHPN2Q8IUC4 686 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 LRRC43Q8N309 656 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 FDXACB1Q9BRP7 624 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 TMEM117Q9H0C3 514 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ATP6V0A4Q9HBG4 840 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 IFT122Q9HBG6 1241 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 TYW1Q9NV66 732 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 RGL1Q9NZL6 768 aa12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 PDCD11Q14690 1871 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-210ENST00000487899 A0A0U1RQF3 1178 aa12.56□□□□□ -0.4
RAB11FIP3-210ENST00000487899 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms