RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 KLHDC10Q6PID8 442 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 CHST14Q8NCH0 376 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 OR5AN1Q8NGI8 311 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 NKD2Q969F2 451 aaPredicted RBP6.48□□□□□ -1.37
SMC4-219ENST00000487747 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 IKZF4Q9H2S9 585 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 MMRN2Q9H8L6 949 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 SAE1Q9UBE0 346 aaPredicted RBP6.48□□□□□ -1.37
SMC4-219ENST00000487747 DENND2AQ9ULE3 1009 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 IGFALSP35858 605 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 FNTBP49356 437 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 SCNN1GP51170 649 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 TGFB2P61812 414 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 HHEXQ03014 270 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 TUBA3CQ13748 450 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 Q6ZRM9 215 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 DDX53Q86TM3 631 aaKnown RBP6.47□□□□□ -1.37
SMC4-219ENST00000487747 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 NEU4Q8WWR8 484 aaPredicted RBP6.47□□□□□ -1.37
SMC4-219ENST00000487747 CHFRQ96EP1 664 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 MAML3Q96JK9 1138 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 SLC6A15Q9H2J7 730 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 ZNF703Q9H7S9 590 aaPredicted RBP6.47□□□□□ -1.37
SMC4-219ENST00000487747 SLC2A4RGQ9NR83 387 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 CDK11AQ9UQ88 783 aaPredicted RBP6.47□□□□□ -1.37
SMC4-219ENST00000487747 GIT1Q9Y2X7 761 aa6.47□□□□□ -1.37
SMC4-219ENST00000487747 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 PPP1R12AO14974 1030 aaPredicted RBP6.46□□□□□ -1.38
SMC4-219ENST00000487747 SDSP20132 328 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 MCM7P33993 719 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 BPIFB4P59827 614 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 ROM1Q03395 351 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
SMC4-219ENST00000487747 MYBPC3Q14896 1274 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 ARHGAP44Q17R89 818 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 SOGA3Q5TF21 947 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 SLFN12LQ6IEE8 588 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 GAREM2Q75VX8 874 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 ZNF627Q7L945 461 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 TMPRSS6Q8IU80 811 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 LARP4BQ92615 738 aaKnown RBP6.46□□□□□ -1.38
SMC4-219ENST00000487747 SLC7A6OSQ96CW6 309 aaPredicted RBP6.46□□□□□ -1.38
SMC4-219ENST00000487747 OSBPL2Q9H1P3 480 aa6.46□□□□□ -1.38
SMC4-219ENST00000487747 UBA6A0AVT1 1052 aaPredicted RBP6.45□□□□□ -1.38
SMC4-219ENST00000487747 OPA1O60313 960 aa6.45□□□□□ -1.38
SMC4-219ENST00000487747 H2AFYO75367 372 aaKnown RBP6.45□□□□□ -1.38
SMC4-219ENST00000487747 SLC9A1P19634 815 aa6.45□□□□□ -1.38
SMC4-219ENST00000487747 TCIRG1Q13488 830 aa6.45□□□□□ -1.38
SMC4-219ENST00000487747 PIK3R6Q5UE93 754 aa6.45□□□□□ -1.38
SMC4-219ENST00000487747 THEMISQ8N1K5 641 aaPredicted RBP6.45□□□□□ -1.38
SMC4-219ENST00000487747 KIAA1958Q8N8K9 716 aa6.45□□□□□ -1.38
SMC4-219ENST00000487747 GCDHQ92947 438 aaPredicted RBP6.45□□□□□ -1.38
SMC4-219ENST00000487747 ACSS2Q9NR19 701 aa6.45□□□□□ -1.38
SMC4-219ENST00000487747 UBE2QL1A1L167 161 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 ASLP04424 464 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 SLC25A3Q00325 362 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 DPTQ07507 201 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 DGKDQ16760 1214 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 FNDC3BQ53EP0 1204 aaKnown RBP6.44□□□□□ -1.38
SMC4-219ENST00000487747 PRAMEF9Q5VWM5 478 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 CREB3L3Q68CJ9 461 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 ESRP1Q6NXG1 681 aaKnown RBP6.44□□□□□ -1.38
SMC4-219ENST00000487747 UNQ6494/PRO21346Q6UXR6 183 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 AMER2Q8N7J2 671 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 GFM2Q969S9 779 aaKnown RBP6.44□□□□□ -1.38
SMC4-219ENST00000487747 TUBGCP5Q96RT8 1024 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 MPHOSPH9Q99550 1183 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 PCIF1Q9H4Z3 704 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 DNAI1Q9UI46 699 aa6.44□□□□□ -1.38
SMC4-219ENST00000487747 HNRNPLP14866 589 aaKnown RBP eCLIP6.43□□□□□ -1.382e-15■■■■■ 47.4
SMC4-219ENST00000487747 CRHR2Q13324 411 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 TTC38Q5R3I4 469 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 CLEC14AQ86T13 490 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 ZNF483Q8TF39 744 aaPredicted RBP6.43□□□□□ -1.38
SMC4-219ENST00000487747 LPPQ93052 612 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 CLIP3Q96DZ5 547 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 CEP89Q96ST8 783 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 ELF4Q99607 663 aaPredicted RBP6.43□□□□□ -1.38
SMC4-219ENST00000487747 AURKAIP1Q9NWT8 199 aaPredicted RBP6.43□□□□□ -1.38
SMC4-219ENST00000487747 KCMF1Q9P0J7 381 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 H2AFY2Q9P0M6 372 aaPredicted RBP6.43□□□□□ -1.38
SMC4-219ENST00000487747 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
SMC4-219ENST00000487747 B4E1Z4 1266 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 H7C1D1 291 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 CBX4O00257 560 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 TOX4O94842 621 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 JMJD7P0C870 316 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 SESN2P58004 480 aaPredicted RBP6.42□□□□□ -1.38
SMC4-219ENST00000487747 FAM111BQ6SJ93 734 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 LDLRAD3Q86YD5 345 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 PLA2G15Q8NCC3 412 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 E2F7Q96AV8 911 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 WDR92Q96MX6 357 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 CABP5Q9NP86 173 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 IL23AQ9NPF7 189 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
SMC4-219ENST00000487747 GOLGA8BA8MQT2 603 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms