RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 PHKA2P46019 1235 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 TOB1P50616 345 aaPredicted RBP10.42□□□□□ -0.74
LCN2-205ENST00000487719 GPC3P51654 580 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 DEFB103AP81534 67 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 ATP2C1P98194 919 aaPredicted RBP10.42□□□□□ -0.74
LCN2-205ENST00000487719 NBR1Q14596 966 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 GPNMBQ14956 572 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 Q7L0L9 218 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 NLRP4Q96MN2 994 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 SH2D3AQ9BRG2 576 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 SEMA6BQ9H3T3 888 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 DHX33Q9H6R0 707 aaKnown RBP10.42□□□□□ -0.74
LCN2-205ENST00000487719 DBR1Q9UK59 544 aaKnown RBP10.42□□□□□ -0.74
LCN2-205ENST00000487719 ST3GAL5Q9UNP4 418 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 RWDD3Q9Y3V2 267 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 COL4A3BPQ9Y5P4 624 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 CITO14578 2027 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 COL4A4P53420 1690 aaPredicted RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 IGKV6-21A0A0C4DH24 114 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 VWA3AA6NCI4 1184 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 HOXA2O43364 376 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 SLC26A4O43511 780 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 USO1O60763 962 aaKnown RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 GPR32O75388 356 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 ERLIN2O94905 339 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 SLC34A2O95436 690 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 FOSL2P15408 326 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 TXLNAP40222 546 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 UBA7P41226 1012 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 PCBP1Q15365 356 aaKnown RBP eCLIP10.41□□□□□ -0.74
LCN2-205ENST00000487719 ZRSR1Q15695 479 aaKnown RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.41□□□□□ -0.74
LCN2-205ENST00000487719 CATSPER4Q7RTX7 472 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 CATSPER3Q86XQ3 398 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 NPAS4Q8IUM7 802 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 ABI1Q8IZP0 508 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 LINC01465Q8N7H1 131 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 IGSF22Q8N9C0 903 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 PIGOQ8TEQ8 1089 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 TOP1MTQ969P6 601 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 VWCEQ96DN2 955 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 CALML4Q96GE6 196 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 AK8Q96MA6 479 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 SAMD11Q96NU1 681 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 TSPYL2Q9H2G4 693 aaPredicted RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 AGO3Q9H9G7 860 aaKnown RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 MTMR10Q9NXD2 777 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 DNM3Q9UQ16 869 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 NOC2LQ9Y3T9 749 aaKnown RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 PCDHB7Q9Y5E2 793 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 PRRC2BQ5JSZ5 2229 aaKnown RBP10.41□□□□□ -0.74
LCN2-205ENST00000487719 COL4A6Q14031 1691 aa10.41□□□□□ -0.74
LCN2-205ENST00000487719 MED24O75448 989 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 STBD1O95210 358 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 SRGAP2CP0DJJ0 459 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 SKIP12755 728 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 SARSP49591 514 aaKnown RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 RARRES1P49788 294 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 PPP2R5AQ15172 486 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 POTEGQ6S5H5 508 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 SLC24A5Q71RS6 500 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 SRGAP1Q7Z6B7 1085 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 FAM228AQ86W67 206 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 TMEM143Q96AN5 459 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 IFT74Q96LB3 600 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 ZNF396Q96N95 335 aaPredicted RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 TGS1Q96RS0 853 aaKnown RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 ADAM2Q99965 735 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 ADAMTS10Q9H324 1103 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 ERVK-5Q9HDB9 667 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 DDX19AQ9NUU7 478 aaKnown RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 WRAP73Q9P2S5 460 aaPredicted RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 STXBP5LQ9Y2K9 1186 aa10.4□□□□□ -0.74
LCN2-205ENST00000487719 YBX2Q9Y2T7 364 aaKnown RBP10.4□□□□□ -0.74
LCN2-205ENST00000487719 TRIP11Q15643 1979 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 A0A087WZ62 844 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.39□□□□□ -0.75
LCN2-205ENST00000487719 ENPP3O14638 875 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 MYOGP15173 224 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 LONP1P36776 959 aaKnown RBP10.39□□□□□ -0.75
LCN2-205ENST00000487719 RAB27AP51159 221 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 LAMTOR4Q0VGL1 99 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 BTG3Q14201 252 aaPredicted RBP10.39□□□□□ -0.75
LCN2-205ENST00000487719 SF3A1Q15459 793 aaKnown RBP10.39□□□□□ -0.75
LCN2-205ENST00000487719 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 FAM102BQ5T8I3 360 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 TWF2Q6IBS0 349 aaKnown RBP10.39□□□□□ -0.75
LCN2-205ENST00000487719 PADI6Q6TGC4 694 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 FIBCD1Q8N539 461 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 C4orf32Q8N8J7 132 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 RNF149Q8NC42 400 aa10.39□□□□□ -0.75
LCN2-205ENST00000487719 TMEM40Q8WWA1 233 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms