RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 GSDMDP57764 484 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 FKBP3Q00688 224 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 CAP1Q01518 475 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 TBX2Q13207 712 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 HSDL1Q3SXM5 330 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 ODR4Q5SWX8 454 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 TMEM63BQ5T3F8 832 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 OLFML2BQ68BL8 750 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 CCDC186Q7Z3E2 898 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 TMC6Q7Z403 805 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 FILIP1Q7Z7B0 1213 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 NELFCDQ8IXH7 590 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 SPIRE2Q8WWL2 714 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 KIFAP3Q92845 792 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 KCNN1Q92952 543 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 SPATA33Q96N06 139 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 DHX33Q9H6R0 707 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 XPNPEP1Q9NQW7 623 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 NRBP2Q9NSY0 501 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 TYW1Q9NV66 732 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 TAB2Q9NYJ8 693 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 GJD2Q9UKL4 321 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 ZKSCAN5Q9Y2L8 839 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 ITIH6Q6UXX5 1313 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 COL6A3P12111 3177 aa9.48□□□□□ -0.89
NUDCD3-209ENST00000487118 LGALS16A8MUM7 142 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 N4BP3O15049 544 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 NKRFO15226 690 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 TEX33O43247 280 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 TGFB1I1O43294 461 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 CALUO43852 315 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 GNA14O95837 355 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 HOXD8P13378 290 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 RGS2P41220 211 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 ADCYAP1R1P41586 468 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 SLC26A2P50443 739 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 GTF2BQ00403 316 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 ACVR2BQ13705 512 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 MTERF2Q49AM1 385 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 IQSEC1Q6DN90 963 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 FBXO46Q6PJ61 603 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 ZSCAN30Q86W11 494 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 ATP8B4Q8TF62 1192 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 TMEM174Q8WUU8 243 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 HVCN1Q96D96 273 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 APBA2Q99767 749 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 SH2D3AQ9BRG2 576 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 NTPCRQ9BSD7 190 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 TUBGCP2Q9BSJ2 902 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 KCNF1Q9H3M0 494 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 AZI2Q9H6S1 392 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 ATP6V0A4Q9HBG4 840 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 GPRC5CQ9NQ84 441 aa9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUDCD3-209ENST00000487118 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 A0A1W2PQC6 194 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 K7ENM7 598 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 SOX1O00570 391 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 TNPO2O14787 897 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 CETN3O15182 167 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 FKTNO75072 461 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 SMPD1P17405 629 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 CTGFP29279 349 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 ARL2P36404 184 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MTIF2P46199 727 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 DNM2P50570 870 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 PEX3P56589 373 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 SNRPFP62306 86 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 KCNA1Q09470 495 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MYBPC2Q14324 1141 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 EMC2Q15006 297 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 PLCB4Q15147 1175 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MAN2A1Q16706 1144 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 DUSP28Q4G0W2 176 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 FAM102BQ5T8I3 360 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 SPECC1LQ69YQ0 1117 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MAEAQ7L5Y9 396 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 C12orf56Q8IXR9 622 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 CCDC150Q8NCX0 1101 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 PPTC7Q8NI37 304 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 CACTINQ8WUQ7 758 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 BSNDQ8WZ55 320 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 CFHR5Q9BXR6 569 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 VPS16Q9H269 839 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 DMAC2Q9NW81 257 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 FLRT1Q9NZU1 646 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 KCNG1Q9UIX4 513 aa9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MYH9P35579 1960 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-209ENST00000487118 MGAMO43451 1857 aa9.45□□□□□ -0.9
NUDCD3-209ENST00000487118 MYH11P35749 1972 aa9.45□□□□□ -0.9
NUDCD3-209ENST00000487118 ESPNB1AK53 854 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms