RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
NEK4-204ENST00000487068 OSBPL7Q9BZF2 842 aa11.41□□□□□ -0.58
NEK4-204ENST00000487068 WRAP73Q9P2S5 460 aaPredicted RBP11.41□□□□□ -0.58
NEK4-204ENST00000487068 LRWD1Q9UFC0 647 aa11.41□□□□□ -0.58
NEK4-204ENST00000487068 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
NEK4-204ENST00000487068 ATG2AQ2TAZ0 1938 aa11.41□□□□□ -0.58
NEK4-204ENST00000487068 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
NEK4-204ENST00000487068 KDM3AQ9Y4C1 1321 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 DENND3A2RUS2 1198 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 LAD1O00515 517 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 CA3P07451 260 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
NEK4-204ENST00000487068 RFC5P40937 340 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 TOB1P50616 345 aaPredicted RBP11.4□□□□□ -0.58
NEK4-204ENST00000487068 EMC2Q15006 297 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 TARBP2Q15633 366 aaKnown RBP11.4□□□□□ -0.58
NEK4-204ENST00000487068 ZRSR1Q15695 479 aaKnown RBP11.4□□□□□ -0.58
NEK4-204ENST00000487068 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.4□□□□□ -0.58
NEK4-204ENST00000487068 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 EXOC8Q8IYI6 725 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 PHOSPHO2Q8TCD6 241 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 SNX29Q8TEQ0 813 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 SNX21Q969T3 373 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 YME1L1Q96TA2 773 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 MTRQ99707 1265 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 TUFT1Q9NNX1 390 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
NEK4-204ENST00000487068 PADI3Q9ULW8 664 aa11.4□□□□□ -0.58
NEK4-204ENST00000487068 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.58
NEK4-204ENST00000487068 MUC3AQ02505 3323 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 GPR182O15218 404 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
NEK4-204ENST00000487068 SYT1P21579 422 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
NEK4-204ENST00000487068 GPC3P51654 580 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 CRYBB1P53674 252 aaPredicted RBP11.39□□□□□ -0.59
NEK4-204ENST00000487068 DRP2Q13474 957 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 KRT79Q5XKE5 535 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 RASSF8Q8NHQ8 419 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 TMEM40Q8WWA1 233 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 PSPC1Q8WXF1 523 aaKnown RBP11.39□□□□□ -0.59
NEK4-204ENST00000487068 CDK5RAP3Q96JB5 506 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 FTHL17Q9BXU8 183 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 PRDM12Q9H4Q4 367 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 AGO3Q9H9G7 860 aaKnown RBP11.39□□□□□ -0.59
NEK4-204ENST00000487068 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 SUCLA2Q9P2R7 463 aaPredicted RBP11.39□□□□□ -0.59
NEK4-204ENST00000487068 LRFN2Q9ULH4 789 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 NOC2LQ9Y3T9 749 aaKnown RBP11.39□□□□□ -0.59
NEK4-204ENST00000487068 SQORQ9Y6N5 450 aa11.39□□□□□ -0.59
NEK4-204ENST00000487068 PLXNA4Q9HCM2 1894 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 A0A087WWV3 80 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 ARHGEF35A5YM69 484 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 ZBTB39O15060 712 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 STX6O43752 255 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 MAFO75444 373 aaPredicted RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 MED24O75448 989 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 SLITRK3O94933 977 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 STBD1O95210 358 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 GJB5O95377 273 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 PRPHP41219 470 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 MRPS5P82675 430 aaKnown RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 ATP2C1P98194 919 aaPredicted RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 FOXD4L5Q5VV16 416 aaPredicted RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 CATSPER3Q86XQ3 398 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 LINC01465Q8N7H1 131 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 TCP11Q8WWU5 503 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 FOXD4L4Q8WXT5 416 aaPredicted RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 TMEM143Q96AN5 459 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 GCOM2Q9BZD3 368 aaPredicted RBP11.38□□□□□ -0.59
NEK4-204ENST00000487068 CERS4Q9HA82 394 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 RAPGEFL1Q9UHV5 662 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 PPME1Q9Y570 386 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 COL4A3BPQ9Y5P4 624 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 STK24Q9Y6E0 443 aa11.38□□□□□ -0.59
NEK4-204ENST00000487068 TRIP11Q15643 1979 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 CITO14578 2027 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 A0A087WZ62 844 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.37□□□□□ -0.59
NEK4-204ENST00000487068 PP2D1A8MPX8 630 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 GPR32O75388 356 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 DGAT1O75907 488 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 BMP15O95972 392 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 FGFR4P22455 802 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 SFPQP23246 707 aaKnown RBP eCLIP11.37□□□□□ -0.59
NEK4-204ENST00000487068 RPA1P27694 616 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 RARRES1P49788 294 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
NEK4-204ENST00000487068 MAEAQ7L5Y9 396 aa11.37□□□□□ -0.59
NEK4-204ENST00000487068 FAM228AQ86W67 206 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms