RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 RAC3P60763 192 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 PHC1P78364 1004 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 ADAM15Q13444 863 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 DGKDQ16760 1214 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 ZBTB41Q5SVQ8 909 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 GPR158Q5T848 1215 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 KIAA1841Q6NSI8 718 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 TIGD7Q6NT04 549 aaPredicted RBP7.52□□□□□ -1.21
LTN1-206ENST00000486427 DDX46Q7L014 1031 aaKnown RBP7.52□□□□□ -1.21
LTN1-206ENST00000486427 CIR1Q86X95 450 aaPredicted RBP7.52□□□□□ -1.21
LTN1-206ENST00000486427 ZNF610Q8N9Z0 462 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 OR14K1Q8NGZ2 314 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 SAMD11Q96NU1 681 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 DPYSL5Q9BPU6 564 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 MTG2Q9H4K7 406 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 CAAP1Q9H8G2 361 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 ST6GALNAC2Q9UJ37 374 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 MSRAQ9UJ68 235 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 FAM184BQ9ULE4 1060 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 OAZ3Q9UMX2 235 aa7.52□□□□□ -1.21
LTN1-206ENST00000486427 LSP1P33241 339 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 BCAR1P56945 870 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 HGFACQ04756 655 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 STRN3Q13033 797 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 TAX1BP1Q86VP1 789 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 DNERQ8NFT8 737 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 RPGRQ92834 1020 aaKnown RBP7.51□□□□□ -1.21
LTN1-206ENST00000486427 USP7Q93009 1102 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 NKD2Q969F2 451 aaPredicted RBP7.51□□□□□ -1.21
LTN1-206ENST00000486427 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 PITHD1Q9GZP4 211 aaPredicted RBP7.51□□□□□ -1.21
LTN1-206ENST00000486427 HAPLN2Q9GZV7 340 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 SMPD4Q9NXE4 827 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 DENND2AQ9ULE3 1009 aa7.51□□□□□ -1.21
LTN1-206ENST00000486427 CTDP1Q9Y5B0 961 aaPredicted RBP7.51□□□□□ -1.21
LTN1-206ENST00000486427 A0A0A6YYJ9 748 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 MAGEA10P43363 369 aaPredicted RBP7.5□□□□□ -1.21
LTN1-206ENST00000486427 NFKB2Q00653 900 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 SPATS1Q496A3 300 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 BROXQ5VW32 411 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 TCTN3Q6NUS6 607 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 BMP8AQ7Z5Y6 402 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 C11orf74Q86VG3 221 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 CHAC2Q8WUX2 184 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 DYDC2Q96IM9 177 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 C8orf49Q96NF6 230 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 IFT22Q9H7X7 185 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 CD248Q9HCU0 757 aa7.5□□□□□ -1.21
LTN1-206ENST00000486427 PATE3B3GLJ2 98 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 FOXS1O43638 330 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 OPHN1O60890 802 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 CLSTN1O94985 981 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 CR2P20023 1033 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 SOX5P35711 763 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 DUSP8Q13202 625 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 ACAP1Q15027 740 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 DDB1Q16531 1140 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 KLHDC10Q6PID8 442 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 ESPNLQ6ZVH7 1005 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 AFAP1L2Q8N4X5 818 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 SLC5A5Q92911 643 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 POLR3BQ9NW08 1133 aaPredicted RBP7.49□□□□□ -1.21
LTN1-206ENST00000486427 USP36Q9P275 1121 aaKnown RBP7.49□□□□□ -1.21
LTN1-206ENST00000486427 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
LTN1-206ENST00000486427 DNAI1Q9UI46 699 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 VWA7Q9Y334 891 aa7.49□□□□□ -1.21
LTN1-206ENST00000486427 A0A0A6YYK5 440 aaPredicted RBP7.48□□□□□ -1.21
LTN1-206ENST00000486427 C2orf78A6NCI8 922 aa7.48□□□□□ -1.21
LTN1-206ENST00000486427 CDC14BO60729 498 aa7.48□□□□□ -1.21
LTN1-206ENST00000486427 VIL1P09327 827 aaKnown RBP7.48□□□□□ -1.21
LTN1-206ENST00000486427 ADAM17P78536 824 aa7.48□□□□□ -1.21
LTN1-206ENST00000486427 CXorf67Q86X51 503 aaPredicted RBP7.48□□□□□ -1.21
LTN1-206ENST00000486427 TTC9BQ8N6N2 239 aa7.48□□□□□ -1.21
LTN1-206ENST00000486427 GIMAP8Q8ND71 665 aaPredicted RBP7.48□□□□□ -1.21
LTN1-206ENST00000486427 TTC1Q99614 292 aa7.48□□□□□ -1.21
LTN1-206ENST00000486427 SOX7Q9BT81 388 aa7.48□□□□□ -1.21
LTN1-206ENST00000486427 FAM126AQ9BYI3 521 aaPredicted RBP7.48□□□□□ -1.21
LTN1-206ENST00000486427 C12orf65Q9H3J6 166 aaKnown RBP7.48□□□□□ -1.21
LTN1-206ENST00000486427 PCDH8O95206 1070 aa7.47□□□□□ -1.21
LTN1-206ENST00000486427 HNRNPLP14866 589 aaKnown RBP eCLIP7.47□□□□□ -1.21
LTN1-206ENST00000486427 ATP2C1P98194 919 aaPredicted RBP7.47□□□□□ -1.21
LTN1-206ENST00000486427 Q8TCH9 128 aa7.47□□□□□ -1.21
LTN1-206ENST00000486427 WDR92Q96MX6 357 aa7.47□□□□□ -1.21
LTN1-206ENST00000486427 PLA2G12BQ9BX93 195 aa7.47□□□□□ -1.21
LTN1-206ENST00000486427 ZFR2Q9UPR6 939 aaKnown RBP7.47□□□□□ -1.21
LTN1-206ENST00000486427 PPP2R3BQ9Y5P8 575 aa7.47□□□□□ -1.21
LTN1-206ENST00000486427 MYPNQ86TC9 1320 aa7.47□□□□□ -1.21
LTN1-206ENST00000486427 PRSS38A1L453 326 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 ZEB2O60315 1214 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 KDM1AO60341 852 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 H2AFYO75367 372 aaKnown RBP7.46□□□□□ -1.22
LTN1-206ENST00000486427 FRMD7Q6ZUT3 714 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 KRT26Q7Z3Y9 468 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 GPR135Q8IZ08 494 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 FUKQ8N0W3 1084 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 CLRN3Q8NCR9 226 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 CHST13Q8NET6 341 aa7.46□□□□□ -1.22
LTN1-206ENST00000486427 GFM2Q969S9 779 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms