RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
PKP4-213ENST00000486254 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
PKP4-213ENST00000486254 SPATC1LQ9H0A9 340 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 EXOC7Q9UPT5 735 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 IQCA1LA6NCM1 817 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 BACH1O14867 736 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 UCHL3P15374 230 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 PON1P27169 355 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
PKP4-213ENST00000486254 SMTNP53814 917 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
PKP4-213ENST00000486254 AMPD2Q01433 879 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
PKP4-213ENST00000486254 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
PKP4-213ENST00000486254 XKR9Q5GH70 373 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 MIS18BP1Q6P0N0 1132 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 ANO5Q75V66 913 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 FASTKD5Q7L8L6 764 aaKnown RBP13.09□□□□□ -0.31
PKP4-213ENST00000486254 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 FAM133AQ8N9E0 248 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 TRIM58Q8NG06 486 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
PKP4-213ENST00000486254 PDLIM7Q9NR12 457 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 PKD2L1Q9P0L9 805 aa13.09□□□□□ -0.31
PKP4-213ENST00000486254 IGKV6D-21A0A0A0MT36 114 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 AKR1B10O60218 316 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 EPHX2P34913 555 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
PKP4-213ENST00000486254 CASP4P49662 377 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 ACTR2P61160 394 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 POLR2FP61218 127 aaKnown RBP13.08□□□□□ -0.32
PKP4-213ENST00000486254 DMP1Q13316 513 aaPredicted RBP13.08□□□□□ -0.32
PKP4-213ENST00000486254 XKR3Q5GH77 459 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 PAPD7Q5XG87 772 aaKnown RBP13.08□□□□□ -0.32
PKP4-213ENST00000486254 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 HAUS6Q7Z4H7 955 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 RNF10Q8N5U6 811 aaKnown RBP13.08□□□□□ -0.32
PKP4-213ENST00000486254 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
PKP4-213ENST00000486254 DEF6Q9H4E7 631 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 BTBD7Q9P203 1132 aa13.08□□□□□ -0.32
PKP4-213ENST00000486254 BTNL10A8MVZ5 291 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ZNF263O14978 683 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ZNF862O60290 1169 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 TLR2O60603 784 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 FMO5P49326 533 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 JAM2P57087 298 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 BFSP1Q12934 665 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 PLS1Q14651 629 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 LDLRAD1Q5T700 205 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 ARMC9Q7Z3E5 817 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 SYCP3Q8IZU3 236 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 CCDC155Q8N6L0 562 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 UBXN4Q92575 508 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 RABGGTAQ92696 567 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 SLC45A1Q9Y2W3 748 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 PCDHA13Q9Y5I0 950 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 SIP14410 1827 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 A0A0U1RQJ8 604 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 CLIC2O15247 247 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 H2AFXP16104 143 aaPredicted RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 PRLRP16471 622 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 MOGSQ13724 837 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 NEDD9Q14511 834 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ASIC2Q16515 512 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 DCAF17Q5H9S7 520 aaPredicted RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 TRAPPC11Q7Z392 1133 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 SRGAP1Q7Z6B7 1085 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 PNMA8AQ86V59 439 aaPredicted RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ATRIPQ8WXE1 791 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 SECISBP2LQ93073 1101 aaKnown RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 LACRTQ9GZZ8 138 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 BCAS3Q9H6U6 928 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ATP6V0A4Q9HBG4 840 aa13.07□□□□□ -0.32
PKP4-213ENST00000486254 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
PKP4-213ENST00000486254 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms