RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FBXO18Q8NFZ0 1043 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 SLC7A3Q8WY07 619 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 ZNF689Q96CS4 500 aaPredicted RBP19.76■□□□□ 0.75
COL6A1-204ENST00000486023 NLRP4Q96MN2 994 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 CEP89Q96ST8 783 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 EIF2AK1Q9BQI3 630 aaKnown RBP19.76■□□□□ 0.75
COL6A1-204ENST00000486023 FDXACB1Q9BRP7 624 aaPredicted RBP19.76■□□□□ 0.75
COL6A1-204ENST00000486023 GCOM2Q9BZD3 368 aaPredicted RBP19.76■□□□□ 0.75
COL6A1-204ENST00000486023 TMEM60Q9H2L4 133 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 ZSWIM4Q9H7M6 989 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 C1orf112Q9NSG2 853 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 SIP14410 1827 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 MYH9P35579 1960 aaKnown RBP19.75■□□□□ 0.75
COL6A1-204ENST00000486023 TBKBP1A7MCY6 615 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 H3BNC9 293 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 DARSP14868 501 aaKnown RBP19.75■□□□□ 0.75
COL6A1-204ENST00000486023 MRPS5P82675 430 aaKnown RBP19.75■□□□□ 0.75
COL6A1-204ENST00000486023 SPIRE1Q08AE8 756 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 PTPROQ16827 1216 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 TJAP1Q5JTD0 557 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 EP400NLQ6ZTU2 488 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 ATXN2LQ8WWM7 1075 aaKnown RBP19.75■□□□□ 0.75
COL6A1-204ENST00000486023 TMEM143Q96AN5 459 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 ASB2Q96Q27 587 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 ATP6V0A4Q9HBG4 840 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 LMCD1Q9NZU5 365 aa19.75■□□□□ 0.75
COL6A1-204ENST00000486023 MRPL42Q9Y6G3 142 aaKnown RBP19.75■□□□□ 0.75
COL6A1-204ENST00000486023 PRRC2BQ5JSZ5 2229 aaKnown RBP19.75■□□□□ 0.75
COL6A1-204ENST00000486023 IGKV6-21A0A0C4DH24 114 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 SLITRK3O94933 977 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 SRGAP2CP0DJJ0 459 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 FGFR1P11362 822 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 TECP42680 631 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 C4orf19Q8IY42 314 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 CCDC43Q96MW1 224 aaKnown RBP19.74■□□□□ 0.75
COL6A1-204ENST00000486023 JPH2Q9BR39 696 aaPredicted RBP19.74■□□□□ 0.75
COL6A1-204ENST00000486023 FOXP1Q9H334 677 aaPredicted RBP19.74■□□□□ 0.75
COL6A1-204ENST00000486023 RC3H2Q9HBD1 1191 aaKnown RBP19.74■□□□□ 0.75
COL6A1-204ENST00000486023 ALG13Q9NP73 1137 aaKnown RBP19.74■□□□□ 0.75
COL6A1-204ENST00000486023 EVPLQ92817 2033 aa19.74■□□□□ 0.75
COL6A1-204ENST00000486023 POTEMA6NI47 508 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 C9IYK1 514 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 CD2BP2O95400 341 aaKnown RBP19.73■□□□□ 0.75
COL6A1-204ENST00000486023 CDC42EP1Q00587 391 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 NBR1Q14596 966 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 TTC38Q5R3I4 469 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 MCTP1Q6DN14 999 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 NOSTRINQ8IVI9 506 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 CMTR2Q8IYT2 770 aaKnown RBP19.73■□□□□ 0.75
COL6A1-204ENST00000486023 ZNF710Q8N1W2 664 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 SYMPKQ92797 1274 aaKnown RBP19.73■□□□□ 0.75
COL6A1-204ENST00000486023 HLA-CQ95604 372 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 MRPL38Q96DV4 380 aaKnown RBP19.73■□□□□ 0.75
COL6A1-204ENST00000486023 TMX3Q96JJ7 454 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 MTMR9Q96QG7 549 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 RWDD3Q9Y3V2 267 aa19.73■□□□□ 0.75
COL6A1-204ENST00000486023 VCANP13611 3396 aa19.72■□□□□ 0.75
COL6A1-204ENST00000486023 GRM6O15303 877 aa19.72■□□□□ 0.75
COL6A1-204ENST00000486023 DSC3Q14574 896 aa19.72■□□□□ 0.75
COL6A1-204ENST00000486023 LONRF3Q496Y0 759 aa19.72■□□□□ 0.75
COL6A1-204ENST00000486023 CRIPAKQ8N1N5 446 aa19.72■□□□□ 0.75
COL6A1-204ENST00000486023 PIGOQ8TEQ8 1089 aa19.72■□□□□ 0.75
COL6A1-204ENST00000486023 PRPF31Q8WWY3 499 aaKnown RBP19.72■□□□□ 0.75
COL6A1-204ENST00000486023 C11orf84Q9BUA3 381 aaPredicted RBP19.72■□□□□ 0.75
COL6A1-204ENST00000486023 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
COL6A1-204ENST00000486023 NOL7Q9UMY1 257 aaKnown RBP19.72■□□□□ 0.75
COL6A1-204ENST00000486023 REV3LO60673 3130 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 RB1P06400 928 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 RFC5P40937 340 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 KCNQ1P51787 676 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 EMC2Q15006 297 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 CATSPER4Q7RTX7 472 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 EXOC8Q8IYI6 725 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 CLP1Q92989 425 aaKnown RBP19.71■□□□□ 0.75
COL6A1-204ENST00000486023 HSD17B14Q9BPX1 270 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 INO80BQ9C086 356 aaPredicted RBP19.71■□□□□ 0.75
COL6A1-204ENST00000486023 TMEM161AQ9NX61 479 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 COL4A3BPQ9Y5P4 624 aa19.71■□□□□ 0.75
COL6A1-204ENST00000486023 OR52Z1P0C646 297 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 LINC00271P0C7V0 271 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 SFPQP23246 707 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL6A1-204ENST00000486023 TWF2Q6IBS0 349 aaKnown RBP19.7■□□□□ 0.74
COL6A1-204ENST00000486023 MAEAQ7L5Y9 396 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 ABI1Q8IZP0 508 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 PSPC1Q8WXF1 523 aaKnown RBP19.7■□□□□ 0.74
COL6A1-204ENST00000486023 TBC1D32Q96NH3 1257 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 MTRQ99707 1265 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 DHX33Q9H6R0 707 aaKnown RBP19.7■□□□□ 0.74
COL6A1-204ENST00000486023 TYW1Q9NV66 732 aaKnown RBP19.7■□□□□ 0.74
COL6A1-204ENST00000486023 HCSTQ9UBK5 93 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 COG5Q9UP83 839 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 PIN4Q9Y237 131 aaKnown RBP19.7■□□□□ 0.74
COL6A1-204ENST00000486023 KIF3AQ9Y496 699 aa19.7■□□□□ 0.74
COL6A1-204ENST00000486023 H3BQV1 296 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 GJB2P29033 226 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 FAM189BP81408 668 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 LAMTOR4Q0VGL1 99 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 AAK1Q2M2I8 961 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 TCEAL5Q5H9L2 206 aa19.69■□□□□ 0.74
COL6A1-204ENST00000486023 ZNF410Q86VK4 478 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms