RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 FAM47EQ6ZV65 393 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 RIN3Q8TB24 985 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 SDR42E1Q8WUS8 393 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 LEO1Q8WVC0 666 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 MAML3Q96JK9 1138 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 CRB3Q9BUF7 120 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 FKBPLQ9UIM3 349 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 RTCAO00442 366 aaKnown RBP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 GJB6O95452 261 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 HNRNPCP07910 306 aaKnown RBP eCLIP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 USP17L7P0C7H9 530 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 ZNF865P0CJ78 1059 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 NUGGCQ68CJ6 796 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 SLC6A19Q695T7 634 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 GALNT17Q6IS24 598 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 EPM2AIP1Q7L775 607 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 ANKRD33Q7Z3H0 272 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 TAB3Q8N5C8 712 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 ARRDC4Q8NCT1 418 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 TRPV1Q8NER1 839 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 NPLOC4Q8TAT6 608 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 EPS8L3Q8TE67 593 aaKnown RBP5.95□□□□□ -1.46
CCDC39-205ENST00000485055 CHURC1Q8WUH1 139 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 FGD4Q96M96 766 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 FAM167BQ9BTA0 163 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 RNF208Q9H0X6 261 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 NLRC4Q9NPP4 1024 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 ZNF536O15090 1300 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 K7ENM7 598 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CYP2D6P10635 497 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 KIF5BP33176 963 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CHKAP35790 457 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FXR1P51114 621 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 UBASH3AP57075 661 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 DNM1Q05193 864 aaKnown RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 PLCB4Q15147 1175 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 SHROOM1Q2M3G4 852 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FBXL19Q6PCT2 694 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 C7orf61Q8IZ16 206 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FAM133AQ8N9E0 248 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 TEX13BQ9BXU2 312 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 TRIM6Q9C030 488 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 DIAPH3Q9NSV4 1193 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FLRT1Q9NZU1 646 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 SCN10AQ9Y5Y9 1956 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 ELP1O95163 1332 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 SERTM1A2A2V5 107 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 F5H6K3 240 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 KIAA0355O15063 1070 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 COBLO75128 1261 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 RFPL1O75677 317 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FCER1AP12319 257 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 EDNRBP24530 442 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 DDIT3P35638 169 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CDK7P50613 346 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 GJA9P57773 515 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 PTPN11Q06124 597 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 KLRC3Q07444 240 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FXNQ16595 210 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 PLA2G4EQ3MJ16 856 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 RILPL1Q5EBL4 403 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 HEATR6Q6AI08 1181 aaKnown RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CPLX2Q6PUV4 134 aaKnown RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CHD1LQ86WJ1 897 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 SLC41A1Q8IVJ1 513 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CNTD1Q8N815 330 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 LILRB1Q8NHL6 650 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CCT6BQ92526 530 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 DESI2Q9BSY9 194 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 IL17RBQ9NRM6 502 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 KLHL11Q9NVR0 708 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 TRMT1Q9NXH9 659 aaKnown RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 MAP10Q9P2G4 905 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FRMPD4Q14CM0 1322 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 FRMPD2Q68DX3 1309 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-205ENST00000485055 CCDC171Q6TFL3 1326 aa5.94□□□□□ -1.46
CCDC39-205ENST00000485055 MPHOSPH10O00566 681 aaKnown RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 ADAMTS4O75173 837 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 MICAL2O94851 1124 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 NDUFB10O96000 172 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 FAM153BP0C7A2 387 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 TOP1P11387 765 aaKnown RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 PRKAR2AP13861 404 aaKnown RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 EIF4A3P38919 411 aaKnown RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 TMPRSS15P98073 1019 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 PTPN21Q16825 1174 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 MAP7D1Q3KQU3 841 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 C6orf132Q5T0Z8 1188 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 VPS53Q5VIR6 699 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 C16orf46Q6P387 395 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 N4BP2L2Q92802 583 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 DYNLL2Q96FJ2 89 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 CLUHP3Q96NS8 147 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 RNF41Q9H4P4 317 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-205ENST00000485055 KIAA1586Q9HCI6 787 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 AAASQ9NRG9 546 aa5.93□□□□□ -1.46
CCDC39-205ENST00000485055 ZMYM5Q9UJ78 669 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms