RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 ACKR2O00590 384 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 SKAP2O75563 359 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 GOSR1O95249 250 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 TSHRP16473 764 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 XBP1P17861 261 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 CTSSP25774 331 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 HOXD13P35453 343 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 HADHAP40939 763 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 TRPC1P48995 793 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 KPNA1P52294 538 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 LIMK1P53667 647 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 NRG1Q02297 640 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 PDE4BQ07343 736 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 ZNF543Q08ER8 600 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 PPA1Q15181 289 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 HIF1AQ16665 826 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 PFKFB4Q16877 469 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 FAM110CQ1W6H9 321 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 SHROOM1Q2M3G4 852 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 ARL13BQ3SXY8 428 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 CREB3L3Q68CJ9 461 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 SLC44A2Q8IWA5 706 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 PLD6Q8N2A8 252 aaKnown RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 PPP1R14CQ8TAE6 165 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 LMBR1Q8WVP7 490 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 ANP32BQ92688 251 aaKnown RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 TMOD4Q9NZQ9 345 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 ORC3Q9UBD5 711 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 C19orf53Q9UNZ5 99 aaPredicted RBP6.84□□□□□ -1.31
KPNA1-208ENST00000485027 COQ6Q9Y2Z9 468 aa6.84□□□□□ -1.31
KPNA1-208ENST00000485027 TGM5O43548 720 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 FGF18O76093 207 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 EGFRP00533 1210 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CLCN2P51788 898 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CACNB3P54284 484 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 TPD52P55327 224 aaPredicted RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 LRP8Q14114 963 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SEMA3AQ14563 771 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CLEC16AQ2KHT3 1053 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CDCP2Q5VXM1 449 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CNSTQ6PJW8 725 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 APOA5Q6Q788 366 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 ABRAXAS1Q6UWZ7 409 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 DDX53Q86TM3 631 aaKnown RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 ZNF619Q8N2I2 560 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 C1GALT1C1Q96EU7 318 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 LTV1Q96GA3 475 aaPredicted RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 MAELQ96JY0 434 aaKnown RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SLC2A13Q96QE2 648 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 C7orf25Q9BPX7 421 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 AGXT2Q9BYV1 514 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CBX8Q9HC52 389 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SPON1Q9HCB6 807 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CYP26B1Q9NR63 512 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 VPS28Q9UK41 221 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 MTF2Q9Y483 593 aaPredicted RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 PCDHA11Q9Y5I1 949 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 IFT172Q9UG01 1749 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 POM121BA6NF01 834 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 TRIM38O00635 465 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 IRAK2O43187 625 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SOAT2O75908 522 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 GSNP06396 782 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 STMN1P16949 149 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 NME2P22392 152 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 ITGA6P23229 1130 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 KCNJ6P48051 423 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 HSPA7P48741 367 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 COPS2P61201 443 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 DHX9Q08211 1270 aaKnown RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 KIAA2012Q0VF49 1180 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 ERV3-1Q14264 604 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 RASA2Q15283 850 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 INF2Q27J81 1249 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 MPEG1Q2M385 716 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 KIAA1211Q6ZU35 1233 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 CEP97Q8IW35 865 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 GOT1L1Q8NHS2 421 aaPredicted RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 TDRD7Q8NHU6 1098 aaKnown RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 FNIP1Q8TF40 1166 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 RIN2Q8WYP3 895 aaPredicted RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 MOGAT1Q96PD6 335 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 PI4K2AQ9BTU6 479 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 XAB2Q9HCS7 855 aaKnown RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 PRDM5Q9NQX1 630 aaPredicted RBP6.83□□□□□ -1.32
KPNA1-208ENST00000485027 KNSTRNQ9Y448 316 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 PCDHA8Q9Y5H6 950 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SNX13Q9Y5W8 968 aa6.83□□□□□ -1.32
KPNA1-208ENST00000485027 SCAF11Q99590 1463 aaKnown RBP6.82□□□□□ -1.32
KPNA1-208ENST00000485027 LCHNA4D1U4 455 aa6.82□□□□□ -1.32
KPNA1-208ENST00000485027 GOLGA8AA7E2F4 631 aa6.82□□□□□ -1.32
KPNA1-208ENST00000485027 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
KPNA1-208ENST00000485027 INO80B-WBP1J3KQ70 363 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms