RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 BRWD3Q6RI45 1802 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 hCG_1642624A0A1W2PR95 340 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 hCG_1984214I3L0E3 225 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA12O60330 932 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 DLX3O60479 287 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 CTNND1O60716 968 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 USP2O75604 605 aaPredicted RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 GLRX3O76003 335 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 CRTAMO95727 393 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 GLI3P10071 1580 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 SLC5A1P13866 664 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ZKSCAN1P17029 563 aaPredicted RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 HSPA6P17066 643 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 MAPK9P45984 424 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ALDH5A1P51649 535 aaPredicted RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PMS1P54277 932 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 USP14P54578 494 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 CTSWP56202 376 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 LLGL1Q15334 1064 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 NR0B2Q15466 257 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ELF2Q15723 593 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 NTRK3Q16288 839 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 BBS9Q3SYG4 887 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ADGRF1Q5T601 910 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 DCAF15Q66K64 600 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ZCCHC8Q6NZY4 707 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ABHD17CQ6PCB6 329 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 LDHAL6AQ6ZMR3 332 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 NKAPQ8N5F7 415 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ANKS4BQ8N8V4 417 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 SMC1BQ8NDV3 1235 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ADCY4Q8NFM4 1077 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PTPRN2Q92932 1015 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 BRF1Q92994 677 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ERP27Q96DN0 273 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 AIFM3Q96NN9 605 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 CRB3Q9BUF7 120 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 ZCCHC4Q9H5U6 513 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 EMC7Q9NPA0 242 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 NMRK2Q9NPI5 230 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 C1orf112Q9NSG2 853 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 SPTLC3Q9NUV7 552 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 C14orf119Q9NWQ9 140 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 THG1LQ9NWX6 298 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 MKS1Q9NXB0 559 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 CLIC5Q9NZA1 410 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 POLG2Q9UHN1 485 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGB6Q9Y5F9 930 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA9Q9Y5G4 932 aaKnown RBP3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA8Q9Y5G5 932 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA7Q9Y5G6 932 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA6Q9Y5G7 932 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA3Q9Y5H0 932 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 PCDHGA2Q9Y5H1 932 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 NHSL1Q5SYE7 1610 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 WASHC2AQ641Q2 1341 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 MYO5BQ9ULV0 1848 aa3.91□□□□□ -1.78
ZNF561-216ENST00000483768 RTEL1-TNFRSF6BF6WH68 1400 aa3.9□□□□□ -1.78
ZNF561-216ENST00000483768 BLMP54132 1417 aaPredicted RBP3.9□□□□□ -1.78
ZNF561-216ENST00000483768 MST1RQ04912 1400 aa3.9□□□□□ -1.78
ZNF561-216ENST00000483768 SETD5Q9C0A6 1442 aa3.9□□□□□ -1.78
ZNF561-216ENST00000483768 TEX51A0A1B0GUA7 166 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 OR14I1A6ND48 311 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 NOP56O00567 594 aaKnown RBP3.9□□□□□ -1.79
ZNF561-216ENST00000483768 PRRG2O14669 202 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 TPP1O14773 563 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 RGS13O14921 159 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 ANP32CO43423 234 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CBFA2T2O43439 604 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 PEX10O60683 326 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SNX2O60749 519 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 PQBP1O60828 265 aaKnown RBP3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SEMA7AO75326 666 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SOD2P04179 222 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SYPP08247 313 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 BMP7P18075 431 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 RHCEP18577 417 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SDHBP21912 280 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CHKAP35790 457 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 KCNJ6P48051 423 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 PCBP3P57721 371 aaKnown RBP3.9□□□□□ -1.79
ZNF561-216ENST00000483768 RNF4P78317 190 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SRSF3P84103 164 aaKnown RBP3.9□□□□□ -1.79
ZNF561-216ENST00000483768 RHDQ02161 417 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 DDX10Q13206 875 aaKnown RBP3.9□□□□□ -1.79
ZNF561-216ENST00000483768 KRT72Q14CN4 511 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 SNX17Q15036 470 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 ACAP2Q15057 778 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CLUL1Q15846 466 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 HYIQ5T013 277 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 PPP4R3AQ6IN85 833 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 B3GNT9Q6UX72 402 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CEP128Q6ZU80 1094 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 USP53Q70EK8 1073 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 TMC3Q7Z5M5 1100 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CATIPQ7Z7H3 387 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 MYLK4Q86YV6 388 aaPredicted RBP3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CREBRFQ8IUR6 639 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CMIPQ8IY22 773 aa3.9□□□□□ -1.79
ZNF561-216ENST00000483768 CCDC144CPQ8IYA2 1237 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms