RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 KIF2AO00139 706 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC16A4O15374 487 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 CTIFO43310 598 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 TLR2O60603 784 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 STAM2O75886 525 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC9A1P19634 815 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 UBA1P22314 1058 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 HNRNPH3P31942 346 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 GNPTABQ3T906 1256 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 DCAF17Q5H9S7 520 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 TMEM63BQ5T3F8 832 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 C2orf69Q8N8R5 385 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 DMAC2Q9NW81 257 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 FBXO40Q9UH90 709 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 DNAH12Q6ZR08 3092 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 ARIH2O95376 493 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 XRCC5P13010 732 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 RPL13P26373 211 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 ICAM3P32942 547 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 CYP2J2P51589 502 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 FAM102BQ5T8I3 360 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 HAUS6Q7Z4H7 955 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 RDM1Q8NG50 284 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 CEP170P1Q96L14 293 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 CBWD1Q9BRT8 395 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 PORCNQ9H237 461 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 L2HGDHQ9H9P8 463 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 ANKEF1Q9NU02 776 aa9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-204ENST00000483763 MYH11P35749 1972 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 PSAPP07602 524 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 NPTX2P47972 431 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 POLR2FP61218 127 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 PRKCEQ02156 737 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 LY6KQ17RY6 165 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 TCERG1LQ5VWI1 586 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 FASTKD5Q7L8L6 764 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 CNPY4Q8N129 248 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 MS4A4AQ96JQ5 239 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 PCYT2Q99447 389 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 LSM14BQ9BX40 385 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 LACRTQ9GZZ8 138 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 PCIF1Q9H4Z3 704 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 EFCC1Q9HA90 598 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 XPNPEP1Q9NQW7 623 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 PDLIM7Q9NR12 457 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 FAM184BQ9ULE4 1060 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 DUSP10Q9Y6W6 482 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 PHLPP2Q6ZVD8 1323 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 ADGRA3Q8IWK6 1321 aa9.69□□□□□ -0.86
CDC42SE1-204ENST00000483763 DNAJC25-GNG10A0A024R161 153 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 GOLGA6L9A6NEM1 432 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 FARP2O94887 1054 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 ATG7O95352 703 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 SUPT20HL2P0C7V6 817 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 PON1P27169 355 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 GTF2BQ00403 316 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 SNAPC2Q13487 334 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 NFIL3Q16649 462 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 TSR1Q2NL82 804 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 HGSNATQ68CP4 663 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 SYCP3Q8IZU3 236 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNF710Q8N1W2 664 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 TMEM161BQ8NDZ6 487 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNF397Q8NF99 534 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 NEK11Q8NG66 645 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 ATP6V0A1Q93050 837 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 MAF1Q9H063 256 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 GANQ9H2C0 597 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 WDR81Q562E7 1941 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 IGSF9BQ9UPX0 1349 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 GSTTP1A0A1W2PQM5 241 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 DYNC1I1O14576 645 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC16A3O15427 465 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 AFPP02771 609 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 TRIM49P0CI25 452 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 TRIM49CP0CI26 452 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 EPB41P11171 864 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 OSBPP22059 807 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 ADSSP30520 456 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 PSMC2P35998 433 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 DLG4P78352 724 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CDK17Q00537 523 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CBWD3Q5JTY5 395 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CBWD5Q5RIA9 395 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 WDR78Q5VTH9 848 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 PDXDC1Q6P996 788 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 HS2ST1Q7LGA3 356 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms