RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 GTF3C2Q8WUA4 911 aaPredicted RBP13.05□□□□□ -0.32
SND1-210ENST00000483503 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 BORCS6Q96GS4 357 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 SPAG5Q96R06 1193 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 IFIH1Q9BYX4 1025 aaKnown RBP13.05□□□□□ -0.32
SND1-210ENST00000483503 SPATC1LQ9H0A9 340 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 NLRC4Q9NPP4 1024 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 ARHGAP20Q9P2F6 1191 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 GABBR1Q9UBS5 961 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
SND1-210ENST00000483503 PTPRFP10586 1907 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 P4HA2O15460 535 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 EXOC3O60645 756 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 TACC1O75410 805 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 TADA3O75528 432 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 DGAT1O75907 488 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 SUPT20HL2P0C7V6 817 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 ERCC3P19447 782 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 RFX1P22670 979 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 CASP4P49662 377 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 CYP2J2P51589 502 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 ALDH5A1P51649 535 aaPredicted RBP13.04□□□□□ -0.32
SND1-210ENST00000483503 KCNA1Q09470 495 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 CETN1Q12798 172 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 DMP1Q13316 513 aaPredicted RBP13.04□□□□□ -0.32
SND1-210ENST00000483503 RAPGEF1Q13905 1077 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 UGCGQ16739 394 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
SND1-210ENST00000483503 XKR3Q5GH77 459 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 C10orf76Q5T2E6 689 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 INTS8Q75QN2 995 aaKnown RBP13.04□□□□□ -0.32
SND1-210ENST00000483503 HAUS6Q7Z4H7 955 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 TSC1Q92574 1164 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 PURBQ96QR8 312 aaKnown RBP13.04□□□□□ -0.32
SND1-210ENST00000483503 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 POLD4Q9HCU8 107 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 PCDHA13Q9Y5I0 950 aa13.04□□□□□ -0.32
SND1-210ENST00000483503 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 PJA2O43164 708 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 RGS20O76081 388 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 CCDC172P0C7W6 258 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 TGFB3P10600 412 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 UCHL3P15374 230 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.322e-9■□□□□ 11.1
SND1-210ENST00000483503 PON1P27169 355 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 MAGEA1P43355 309 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 ACTR2P61160 394 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 KLHL30Q0D2K2 578 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 NEDD9Q14511 834 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
SND1-210ENST00000483503 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 KCNV1Q6PIU1 500 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
SND1-210ENST00000483503 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 GOLGA1Q92805 767 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
SND1-210ENST00000483503 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 ALS2CR12Q96Q35 445 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
SND1-210ENST00000483503 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
SND1-210ENST00000483503 ARGLU1Q9NWB6 273 aaPredicted RBP13.03□□□□□ -0.32
SND1-210ENST00000483503 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 BTBD7Q9P203 1132 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
SND1-210ENST00000483503 FANCGO15287 622 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 GFPT2O94808 682 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 ATG7O95352 703 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 FERP16591 822 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 EDNRBP24530 442 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 FMO5P49326 533 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 PEX3P56589 373 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 ENPEPQ07075 957 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 BFSP1Q12934 665 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 ASTE1Q2TB18 679 aaPredicted RBP13.02□□□□□ -0.33
SND1-210ENST00000483503 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.33
SND1-210ENST00000483503 FAM160B1Q5W0V3 765 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 ANO5Q75V66 913 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 SRGAP1Q7Z6B7 1085 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 USP37Q86T82 979 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 NCAPG2Q86XI2 1143 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 RNF10Q8N5U6 811 aaKnown RBP13.02□□□□□ -0.33
SND1-210ENST00000483503 XXYLT1Q8NBI6 393 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
SND1-210ENST00000483503 BCAS3Q9H6U6 928 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms