RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 NYXQ9GZU5 481 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 GPRC5CQ9NQ84 441 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 USP40Q9NVE5 1235 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 ATP6V0A2Q9Y487 856 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 TRIM17Q9Y577 477 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 BACE2Q9Y5Z0 518 aa4.72□□□□□ -1.65
LRCH3-217ENST00000483442 ASTN2O75129 1339 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-217ENST00000483442 PSMD14O00487 310 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 FUCA1P04066 466 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 GPTP24298 496 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 TM4SF4P48230 202 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 SEPHS1P49903 392 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 SLC7A5Q01650 507 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 KIAA2012Q0VF49 1180 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 PRAMEF18Q5VWM3 479 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 SUSD4Q5VX71 490 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 STK32CQ86UX6 486 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 FAM26EQ8N5C1 309 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 FAM169BQ8N8A8 192 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 NETO2Q8NC67 525 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 PLEKHO2Q8TD55 490 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 CPA5Q8WXQ8 436 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 DPF2Q92785 391 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 ZBTB8AQ96BR9 441 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 CDCA5Q96FF9 252 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 SHDQ96IW2 340 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 RTFDC1Q9BY42 306 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-217ENST00000483442 PANK3Q9H999 370 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 SCAF8Q9UPN6 1271 aaKnown RBP4.71□□□□□ -1.66
LRCH3-217ENST00000483442 A0A0C4DFX4 3053 aa4.71□□□□□ -1.66
LRCH3-217ENST00000483442 NPHP3-ACAD11A0A0J9YXS1 232 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 K7ESM1 405 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 ARNTLO00327 626 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 BBOX1O75936 387 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 SNRPA1P09661 255 aaKnown RBP4.7□□□□□ -1.66
LRCH3-217ENST00000483442 SARSP49591 514 aaKnown RBP4.7□□□□□ -1.66
LRCH3-217ENST00000483442 AMPD2Q01433 879 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 PUM1Q14671 1186 aaKnown RBP eCLIP4.7□□□□□ -1.66
LRCH3-217ENST00000483442 INF2Q27J81 1249 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 SLC4A8Q2Y0W8 1093 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 ERICH6BQ5W0A0 696 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 WWC2Q6AWC2 1192 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 OTOP1Q7RTM1 612 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 LINC00482Q8N8I6 264 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 PEX11GQ96HA9 241 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
LRCH3-217ENST00000483442 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 PHAXQ9H814 394 aaKnown RBP4.7□□□□□ -1.66
LRCH3-217ENST00000483442 DBNDD1Q9H9R9 158 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 GGA3Q9NZ52 723 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 RRP7AQ9Y3A4 280 aaKnown RBP4.7□□□□□ -1.66
LRCH3-217ENST00000483442 SNED1Q8TER0 1413 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 KIF7Q2M1P5 1343 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 CDHR2Q9BYE9 1310 aa4.7□□□□□ -1.66
LRCH3-217ENST00000483442 KIF20BQ96Q89 1820 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 ABCC12Q96J65 1359 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 SGSM2O43147 1006 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 PPM1BO75688 479 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 ITGB3P05106 788 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 PLS3P13797 630 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 PAMP19021 973 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 PRKG1Q13976 671 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 KIAA1211LQ6NV74 962 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 TTLL7Q6ZT98 887 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 C19orf47Q8N9M1 422 aaKnown RBP4.69□□□□□ -1.66
LRCH3-217ENST00000483442 ADAMTS17Q8TE56 1095 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 COPS5Q92905 334 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 CRBNQ96SW2 442 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 GBP3Q9H0R5 595 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 PTPN22Q9Y2R2 807 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 MRC1P22897 1456 aa4.69□□□□□ -1.66
LRCH3-217ENST00000483442 SCN11AQ9UI33 1791 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 AKAP11Q9UKA4 1901 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 ERVV-1B6SEH8 477 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 U2SURPO15042 1029 aaKnown RBP4.68□□□□□ -1.66
LRCH3-217ENST00000483442 DIAPH1O60610 1272 aaKnown RBP4.68□□□□□ -1.66
LRCH3-217ENST00000483442 KCNH1O95259 989 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 MYL6BP14649 208 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 RPS12P25398 132 aaKnown RBP4.68□□□□□ -1.66
LRCH3-217ENST00000483442 MAGEA10P43363 369 aaPredicted RBP4.68□□□□□ -1.66
LRCH3-217ENST00000483442 FKBP1BP68106 108 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 ADAM17P78536 824 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 SCRN1Q12765 414 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 SREBF2Q12772 1141 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 GRB10Q13322 594 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 TCIRG1Q13488 830 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 COL9A2Q14055 689 aaPredicted RBP4.68□□□□□ -1.66
LRCH3-217ENST00000483442 SLC9A5Q14940 896 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 PPP2R5EQ16537 467 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 PPP1R42Q7Z4L9 355 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 CABP7Q86V35 215 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 TEX2Q8IWB9 1127 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 CD99L2Q8TCZ2 262 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 RASGRP4Q8TDF6 673 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 USP33Q8TEY7 942 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 ZNF428Q96B54 188 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms