RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC127Q96BQ5 260 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 EDC3Q96F86 508 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 AIFM3Q96NN9 605 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 PHF12Q96QT6 1004 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 STK33Q9BYT3 514 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 IFIH1Q9BYX4 1025 aaKnown RBP8.43□□□□□ -1.06
COL4A5-205ENST00000483338 NDEL1Q9GZM8 345 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 EXOC1Q9NV70 894 aa8.43□□□□□ -1.06
COL4A5-205ENST00000483338 CPS1P31327 1500 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 BCL9LQ86UU0 1499 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TBX10O75333 385 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 KRT36O76013 467 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 S100A1P23297 94 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 RGS2P41220 211 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TUFMP49411 452 aaKnown RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 SERPINB8P50452 374 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 HS2ST1Q7LGA3 356 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 ZBED8Q8IZ13 594 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 PPFIBP2Q8ND30 876 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 CEP70Q8NHQ1 597 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 FBXO41Q8TF61 875 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 SLC39A3Q9BRY0 314 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 RNF14Q9UBS8 474 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 SEC63Q9UGP8 760 aaKnown RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 USP6P35125 1406 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 A0A0G2JLW4 131 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 CAPN9O14815 690 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 VILLO15195 856 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 RNASEH1O60930 286 aaKnown RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 VPS41P49754 854 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TEFQ10587 303 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 CNGA2Q16280 664 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 EPHA10Q5JZY3 1008 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 LMBRD2Q68DH5 695 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 CGB2Q6NT52 195 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 CABP7Q86V35 215 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 MB21D1Q8N884 522 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 MYLK2Q9H1R3 596 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TIMMDC1Q9NPL8 285 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 QPCTLQ9NXS2 382 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 DKK3Q9UBP4 350 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 PCDHA13Q9Y5I0 950 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 BHMG1C9JSJ3 638 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 E9PBE3 544 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TBC1D12O60347 775 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 DGKIO75912 1065 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 HOXD10P28358 340 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 PFKPQ01813 784 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 SLC34A1Q06495 639 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 MSLNQ13421 630 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 DEPDC1Q5TB30 811 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 B3GNT6Q6ZMB0 384 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 USP49Q70CQ1 688 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 ST13P4Q8IZP2 240 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 BBS5Q8N3I7 341 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 ANKRD13CQ8N6S4 541 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 CFAP61Q8NHU2 1237 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 INPP5DQ92835 1189 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 MTMR8Q96EF0 704 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 KIAA1683Q9H0B3 1180 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 USP29Q9HBJ7 922 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 SAP30BPQ9UHR5 308 aaKnown RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TMA7Q9Y2S6 64 aaKnown RBP8.42□□□□□ -1.06
COL4A5-205ENST00000483338 TRIM17Q9Y577 477 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
COL4A5-205ENST00000483338 MYH4Q9Y623 1939 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 MAP3K7O43318 606 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 LRRC14Q15048 493 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 SPA17Q15506 151 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 METTL21CQ5VZV1 264 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 ZNF804AQ7Z570 1209 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 RSPH3Q86UC2 560 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 FAM186BQ8IYM0 893 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 PGM2Q96G03 612 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 NGLY1Q96IV0 654 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 INPP4AQ96PE3 977 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 TTYH3Q9C0H2 523 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC68Q9H2F9 335 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 BHMT2Q9H2M3 363 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 SMIM31A0A1B0GVY4 71 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 WNT7AO00755 349 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 KDM1AO60341 852 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 MGEA5O60502 916 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 T-ENOLP0DO92 83 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 AFMP43652 599 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 RNF43Q68DV7 783 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 DSTYKQ6XUX3 929 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 C4orf50Q6ZRC1 276 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 RIC3Q7Z5B4 369 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 PATL1Q86TB9 770 aaKnown RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 NUP93Q8N1F7 819 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 LPIN2Q92539 896 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 DGCR14Q96DF8 476 aaKnown RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC42Q96M95 316 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 EPB41L4BQ9H329 900 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 AZI2Q9H6S1 392 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 GIT1Q9Y2X7 761 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms