RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 ECHDC2Q86YB7 292 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 TEX2Q8IWB9 1127 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 ABI1Q8IZP0 508 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 MRPL43Q8N983 215 aaKnown RBP8.38□□□□□ -1.07
CSDE1-206ENST00000483030 CASP10Q92851 521 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF668Q96K58 619 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-206ENST00000483030 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 POMKQ9H5K3 350 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 NR2E1Q9Y466 385 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-206ENST00000483030 HCFC2Q9Y5Z7 792 aa8.38□□□□□ -1.07
CSDE1-206ENST00000483030 KAT6AQ92794 2004 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 IGLV3-22A0A075B6J6 115 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 C2CD4DB7Z1M9 353 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 NT5C1B-RDH14C9J2C7 533 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 MAGEB2O15479 319 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 BRD1O95696 1058 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 CXCL14O95715 111 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 WEE2P0C1S8 567 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 CA8P35219 290 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 NUBP1P53384 320 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 ITIH3Q06033 890 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 MTMR3Q13615 1198 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 SMC1AQ14683 1233 aaKnown RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 RTN1Q16799 776 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 CLLU1OSQ5K130 101 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 EFCAB12Q6NXP0 572 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 KANK3Q6NY19 840 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 UBALD2Q8IYN6 164 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 LRRC71Q8N4P6 559 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 C12orf76Q8N812 135 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 TCEANC2Q96MN5 208 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 YTHDC1Q96MU7 727 aaKnown RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 NECTIN4Q96NY8 510 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 MAP7D2Q96T17 732 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF577Q9BSK1 485 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 GLT8D2Q9H1C3 349 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 SMOC2Q9H3U7 446 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 TBC1D22BQ9NU19 505 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 RBM28Q9NW13 759 aaKnown RBP8.37□□□□□ -1.07
CSDE1-206ENST00000483030 BARHL2Q9NY43 387 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 GABBR1Q9UBS5 961 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 LIMD1Q9UGP4 676 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 SORCS3Q9UPU3 1222 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 AKT3Q9Y243 479 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 PCDHA10Q9Y5I2 948 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 ATG2AQ2TAZ0 1938 aa8.37□□□□□ -1.07
CSDE1-206ENST00000483030 A0A0U1RQF3 1178 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 PROB1E7EW31 1015 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ADAMTS3O15072 1205 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ZBTB43O43298 467 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ASGR2P07307 311 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 PSAPP07602 524 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 CYP3A4P08684 503 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 FGFR4P22455 802 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 TMOD1P28289 359 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 MTHFRP42898 656 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ALDH7A1P49419 539 aaKnown RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 METAP2P50579 478 aaKnown RBP eCLIP8.36□□□□□ -1.071e-12■□□□□ 10.3
CSDE1-206ENST00000483030 EXOSC10Q01780 885 aaKnown RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 BMS1Q14692 1282 aaKnown RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 RARS2Q5T160 578 aaKnown RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF746Q6NUN9 644 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ASCL5Q7RTU5 278 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 SMAP1Q8IYB5 467 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 SLC39A11Q8N1S5 342 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 TMEM105Q8N8V8 129 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 TMEM87AQ8NBN3 555 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 HELQQ8TDG4 1101 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 CRYGNQ8WXF5 182 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 NRBP2Q9NSY0 501 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-206ENST00000483030 TCEAL9Q9UHQ7 104 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 CEP131Q9UPN4 1083 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 SAMM50Q9Y512 469 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 CACNA1HO95180 2353 aa8.36□□□□□ -1.07
CSDE1-206ENST00000483030 GOLGA8AA7E2F4 631 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 GOLGA8BA8MQT2 603 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 hCG_1984214I3L0E3 225 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF862O60290 1169 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 CSDE1O75534 798 aaKnown RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 EOMESO95936 686 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 DARSP14868 501 aaKnown RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 CDC27P30260 824 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 BCAR1P56945 870 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 PRR16Q569H4 304 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 ATAT1Q5SQI0 421 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms