RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 PLVAPQ9BX97 442 aa23.23■■□□□ 1.31
TRA2A-206ENST00000482395 ELAC1Q9H777 363 aaKnown RBP23.23■■□□□ 1.31
TRA2A-206ENST00000482395 CYP26B1Q9NR63 512 aa23.23■■□□□ 1.31
TRA2A-206ENST00000482395 PCDHA12Q9UN75 941 aa23.23■■□□□ 1.31
TRA2A-206ENST00000482395 PCDHB7Q9Y5E2 793 aa23.23■■□□□ 1.31
TRA2A-206ENST00000482395 MGEA5O60502 916 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 ZSCAN20P17040 1043 aaPredicted RBP23.22■■□□□ 1.31
TRA2A-206ENST00000482395 BMPR1AP36894 532 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 TIGD5Q53EQ6 642 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 OTUD6AQ7L8S5 288 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 ZNF410Q86VK4 478 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 SLC7A3Q8WY07 619 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 INO80BQ9C086 356 aaPredicted RBP23.22■■□□□ 1.31
TRA2A-206ENST00000482395 LMAN2LQ9H0V9 348 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 FOXP1Q9H334 677 aaPredicted RBP23.22■■□□□ 1.31
TRA2A-206ENST00000482395 ZSWIM4Q9H7M6 989 aa23.22■■□□□ 1.31
TRA2A-206ENST00000482395 C9IYK1 514 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 GAS2O43903 313 aaKnown RBP23.21■■□□□ 1.31
TRA2A-206ENST00000482395 LINC00271P0C7V0 271 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 DARSP14868 501 aaKnown RBP23.21■■□□□ 1.31
TRA2A-206ENST00000482395 DSC3Q14574 896 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 NAALADL2Q58DX5 795 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 FBXO18Q8NFZ0 1043 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 NLRP7Q8WX94 980 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 P2RX5Q93086 422 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 GCOM2Q9BZD3 368 aaPredicted RBP23.21■■□□□ 1.31
TRA2A-206ENST00000482395 ATG2AQ2TAZ0 1938 aa23.21■■□□□ 1.31
TRA2A-206ENST00000482395 TMEM150BA6NC51 233 aa23.2■■□□□ 1.3
TRA2A-206ENST00000482395 RFC5P40937 340 aa23.2■■□□□ 1.3
TRA2A-206ENST00000482395 HLA-CQ95604 372 aa23.2■■□□□ 1.3
TRA2A-206ENST00000482395 TTC12Q9H892 705 aaPredicted RBP23.2■■□□□ 1.3
TRA2A-206ENST00000482395 TMEM161AQ9NX61 479 aa23.2■■□□□ 1.3
TRA2A-206ENST00000482395 KIF3AQ9Y496 699 aa23.2■■□□□ 1.3
TRA2A-206ENST00000482395 HOXA2O43364 376 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 YWHABP31946 246 aaKnown RBP23.19■■□□□ 1.3
TRA2A-206ENST00000482395 POLGP54098 1239 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-206ENST00000482395 FAM189BP81408 668 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 GUCY1B3Q02153 619 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 DYDC2Q96IM9 177 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 CEP170P1Q96L14 293 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 MTMR9Q96QG7 549 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 DHX33Q9H6R0 707 aaKnown RBP23.19■■□□□ 1.3
TRA2A-206ENST00000482395 DACT1Q9NYF0 836 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 SUCLA2Q9P2R7 463 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-206ENST00000482395 REV3LO60673 3130 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 BRWD1Q9NSI6 2320 aa23.19■■□□□ 1.3
TRA2A-206ENST00000482395 LYPLA2O95372 231 aa23.18■■□□□ 1.3
TRA2A-206ENST00000482395 SFPQP23246 707 aaKnown RBP eCLIP23.18■■□□□ 1.3
TRA2A-206ENST00000482395 DRP2Q13474 957 aa23.18■■□□□ 1.3
TRA2A-206ENST00000482395 GNL2Q13823 731 aaKnown RBP23.18■■□□□ 1.3
TRA2A-206ENST00000482395 PLA2G4FQ68DD2 849 aa23.18■■□□□ 1.3
TRA2A-206ENST00000482395 TCP11Q8WWU5 503 aa23.18■■□□□ 1.3
TRA2A-206ENST00000482395 EIF2AK1Q9BQI3 630 aaKnown RBP23.18■■□□□ 1.3
TRA2A-206ENST00000482395 SH2D3AQ9BRG2 576 aa23.18■■□□□ 1.3
TRA2A-206ENST00000482395 ATP6V0A4Q9HBG4 840 aa23.18■■□□□ 1.3
TRA2A-206ENST00000482395 WRAP73Q9P2S5 460 aaPredicted RBP23.18■■□□□ 1.3
TRA2A-206ENST00000482395 MRPL42Q9Y6G3 142 aaKnown RBP23.18■■□□□ 1.3
TRA2A-206ENST00000482395 TXKP42681 527 aa23.17■■□□□ 1.3
TRA2A-206ENST00000482395 TRAPPC10P48553 1259 aa23.17■■□□□ 1.3
TRA2A-206ENST00000482395 RHPN2Q8IUC4 686 aa23.17■■□□□ 1.3
TRA2A-206ENST00000482395 CHST12Q9NRB3 414 aa23.17■■□□□ 1.3
TRA2A-206ENST00000482395 RGL1Q9NZL6 768 aa23.17■■□□□ 1.3
TRA2A-206ENST00000482395 SPTBN5Q9NRC6 3674 aaKnown RBP23.16■■□□□ 1.3
TRA2A-206ENST00000482395 SLITRK3O94933 977 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 MCM2P49736 904 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 NPEPPSP55786 919 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 CYP4A11Q02928 519 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 CTTNQ14247 550 aaKnown RBP23.16■■□□□ 1.3
TRA2A-206ENST00000482395 PAN2Q504Q3 1202 aaKnown RBP23.16■■□□□ 1.3
TRA2A-206ENST00000482395 NOSTRINQ8IVI9 506 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 TPH2Q8IWU9 490 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 RSPH1Q8WYR4 309 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 ZNF668Q96K58 619 aaPredicted RBP23.16■■□□□ 1.3
TRA2A-206ENST00000482395 HSD17B14Q9BPX1 270 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 NSUN3Q9H649 340 aaKnown RBP23.16■■□□□ 1.3
TRA2A-206ENST00000482395 AAASQ9NRG9 546 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 NOL7Q9UMY1 257 aaKnown RBP23.16■■□□□ 1.3
TRA2A-206ENST00000482395 COL4A3BPQ9Y5P4 624 aa23.16■■□□□ 1.3
TRA2A-206ENST00000482395 VCANP13611 3396 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 A0A087WZ62 844 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 WNT7AO00755 349 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 ASAP2O43150 1006 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 MCM7P33993 719 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 XKR9Q5GH70 373 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 PSPC1Q8WXF1 523 aaKnown RBP23.15■■□□□ 1.3
TRA2A-206ENST00000482395 MTRQ99707 1265 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 FDXACB1Q9BRP7 624 aaPredicted RBP23.15■■□□□ 1.3
TRA2A-206ENST00000482395 TRAIPQ9BWF2 469 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 ANKEF1Q9NU02 776 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 PLXNA4Q9HCM2 1894 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 TTC28Q96AY4 2481 aa23.15■■□□□ 1.3
TRA2A-206ENST00000482395 IBSPP21815 317 aaPredicted RBP23.14■■□□□ 1.29
TRA2A-206ENST00000482395 EMC2Q15006 297 aa23.14■■□□□ 1.29
TRA2A-206ENST00000482395 CSPP1Q1MSJ5 1256 aa23.14■■□□□ 1.29
TRA2A-206ENST00000482395 CCDC43Q96MW1 224 aaKnown RBP23.14■■□□□ 1.29
TRA2A-206ENST00000482395 TMEM117Q9H0C3 514 aa23.14■■□□□ 1.29
TRA2A-206ENST00000482395 NCOR1O75376 2440 aa23.14■■□□□ 1.29
TRA2A-206ENST00000482395 TCF20Q9UGU0 1960 aaKnown RBP23.14■■□□□ 1.29
TRA2A-206ENST00000482395 A0A0U1RQF3 1178 aa23.13■■□□□ 1.29
TRA2A-206ENST00000482395 TBKBP1A7MCY6 615 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms