RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 EVI5O60447 810 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 HIP1RO75146 1068 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 SYN1P17600 705 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 TMOD1P28289 359 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 MCM4P33991 863 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 DNM2P50570 870 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 PTK7Q13308 1070 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-208ENST00000482310 ARSHQ5FYA8 562 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 KIAA0319LQ8IZA0 1049 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 FMR1NBQ8N0W7 255 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-208ENST00000482310 ASAP3Q8TDY4 903 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 JPH2Q9BR39 696 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-208ENST00000482310 REEP2Q9BRK0 252 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 HIPK3Q9H422 1215 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 PDLIM7Q9NR12 457 aa14.68□□□□□ -0.06
HDAC1-208ENST00000482310 SUCLA2Q9P2R7 463 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-208ENST00000482310 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-208ENST00000482310 FAM237AA0A1B0GTK4 181 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 SMIM35A0A1B0GVV1 85 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 KINO60870 393 aaKnown RBP14.67□□□□□ -0.06
HDAC1-208ENST00000482310 SRGAP2CP0DJJ0 459 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 IDEP14735 1019 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 CYP2C18P33260 490 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 CCL23P55773 120 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 ASIC1P78348 528 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 SNW1Q13573 536 aaKnown RBP14.67□□□□□ -0.06
HDAC1-208ENST00000482310 KIZQ2M2Z5 673 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 ZNF618Q5T7W0 954 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 C1orf53Q5VUE5 145 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 TAF2Q6P1X5 1199 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 KRBA2Q6ZNG9 492 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 C1orf186Q6ZWK4 172 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 MCPH1Q8NEM0 835 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 TCP11Q8WWU5 503 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
HDAC1-208ENST00000482310 DDX12PQ92771 950 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 PYM1Q9BRP8 204 aaKnown RBP14.67□□□□□ -0.06
HDAC1-208ENST00000482310 SEZ6LQ9BYH1 1024 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 CUEDC2Q9H467 287 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 DACT1Q9NYF0 836 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 PPME1Q9Y570 386 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 CDY2AQ9Y6F7 541 aa14.67□□□□□ -0.06
HDAC1-208ENST00000482310 IGKV6-21A0A0C4DH24 114 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 LRRIQ4A6NIV6 560 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 M0QZ92 97 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TBCAO75347 108 aaKnown RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 FAM13AO94988 1023 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 SLFN14P0C7P3 912 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 CKBP12277 381 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 NLRP11P59045 1033 aaKnown RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 MRPS6P82932 125 aaKnown RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 CUL4BQ13620 913 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 CAMK4Q16566 473 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TRIM71Q2Q1W2 868 aaKnown RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 IER5Q5VY09 327 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 RSPH3Q86UC2 560 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 CCDC155Q8N6L0 562 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 LINC01465Q8N7H1 131 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 ENGASEQ8NFI3 743 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 GPT2Q8TD30 523 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 PRPF31Q8WWY3 499 aaKnown RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 BSNDQ8WZ55 320 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 SCLYQ96I15 445 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TOX2Q96NM4 488 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 OSMRQ99650 979 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 KIFC3Q9BVG8 833 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 NOC4LQ9BVI4 516 aaKnown RBP14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 PRO3102Q9H379 93 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 TBC1D7Q9P0N9 293 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 PRKAG2Q9UGJ0 569 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 COL4A3BPQ9Y5P4 624 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 MICAL3Q7RTP6 2002 aa14.66□□□□□ -0.06
HDAC1-208ENST00000482310 CSDE1O75534 798 aaKnown RBP14.65□□□□□ -0.06
HDAC1-208ENST00000482310 RAG1P15918 1043 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 GLRA2P23416 452 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 LAMTOR4Q0VGL1 99 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 MAPK7Q13164 816 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 BFSP2Q13515 415 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 PNOCQ13519 176 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 GIT2Q14161 759 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 EXOC8Q8IYI6 725 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 KCTD17Q8N5Z5 321 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 MAGEF1Q9HAY2 307 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 KBTBD4Q9NVX7 518 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 USP25Q9UHP3 1055 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 TBX21Q9UL17 535 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 TRPV2Q9Y5S1 764 aa14.65□□□□□ -0.06
HDAC1-208ENST00000482310 A0A087WZ62 844 aa14.64□□□□□ -0.07
HDAC1-208ENST00000482310 CCDC169A6NNP5 214 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms