RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ACOT7O00154 380 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 CRTAMO95727 393 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 AMY2AP04746 511 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 FAHP16930 419 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 AMY2BP19961 511 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 PAN2Q504Q3 1202 aaKnown RBP3.28□□□□□ -1.88
USH2A-204ENST00000481786 C2orf27AQ580R0 203 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 TRIM61Q5EBN2 209 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 Q6ZSN1 163 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 KCTD1Q719H9 257 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 C16orf59Q7L2K0 433 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 MTDHQ86UE4 582 aaKnown RBP3.28□□□□□ -1.88
USH2A-204ENST00000481786 GSTCDQ8NEC7 633 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 ZSWIM2Q8NEG5 633 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 NUDT10Q8NFP7 164 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 IL17DQ8TAD2 202 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 SLC7A14Q8TBB6 771 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 FBXW5Q969U6 566 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 NUDT11Q96G61 164 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 DRC1Q96MC2 740 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 PLEKHG4BQ96PX9 1271 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 TMEM209Q96SK2 561 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 SLC52A2Q9HAB3 445 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 NUB1Q9Y5A7 615 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 PCDHA9Q9Y5H5 950 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 EID1Q9Y6B2 187 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 PTCH2Q9Y6C5 1203 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 AHDC1Q5TGY3 1603 aaPredicted RBP3.28□□□□□ -1.88
USH2A-204ENST00000481786 PLXNC1O60486 1568 aa3.28□□□□□ -1.88
USH2A-204ENST00000481786 NKTRP30414 1462 aaKnown RBP3.28□□□□□ -1.88
USH2A-204ENST00000481786 KIDINS220Q9ULH0 1771 aa3.28□□□□□ -1.89
USH2A-204ENST00000481786 SETD5Q9C0A6 1442 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 SPAG9O60271 1321 aaKnown RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 TIAM1Q13009 1591 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 SAMD9Q5K651 1589 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 CCDC163A0A0D9SF12 145 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 KCNQ2O43526 872 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 EFCAB14O75071 495 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 SRGAP2CP0DJJ0 459 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 PYGMP11217 842 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 COL6A1P12109 1028 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 PDE6AP16499 860 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 NAT1P18440 290 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 KRT4P19013 534 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 PRELPP51888 382 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 COL10A1Q03692 680 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 BMS1Q14692 1282 aaKnown RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 GPR19Q15760 415 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 NFE2L2Q16236 605 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 HS1BP3Q53T59 392 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 TMC5Q6UXY8 1006 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 Q6ZPA2 131 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 ARHGAP36Q6ZRI8 547 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 NPM2Q86SE8 214 aaKnown RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 OSTM1Q86WC4 334 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 C1orf210Q8IVY1 113 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 FUKQ8N0W3 1084 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 KLHL36Q8N4N3 616 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 DTX3Q8N9I9 347 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 CACTINQ8WUQ7 758 aaKnown RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 UBXN4Q92575 508 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 LRRC59Q96AG4 307 aaKnown RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 SCLYQ96I15 445 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 CLIC6Q96NY7 704 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 CD244Q9BZW8 370 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 NDOR1Q9UHB4 597 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 CBLCQ9ULV8 474 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 SRPK3Q9UPE1 567 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 XIRP1Q702N8 1843 aaKnown RBP3.27□□□□□ -1.89
USH2A-204ENST00000481786 ARHGAP23Q9P227 1491 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 MYO5CQ9NQX4 1742 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 RTEL1-TNFRSF6BF6WH68 1400 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 NCOA3Q9Y6Q9 1424 aa3.27□□□□□ -1.89
USH2A-204ENST00000481786 UNC13BO14795 1591 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 DIP2AQ14689 1571 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 WASHC2CQ9Y4E1 1318 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 CCDC66A2RUB6 948 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 FAM90A27PA6NNH2 459 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 ZNF561-AS1K7EIQ3 104 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 MAN2B1O00754 1011 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 RASGRP1O95267 797 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 CKMP06732 381 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 JAM2P57087 298 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 KRTAP10-11P60412 298 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 LACTBP83111 547 aaPredicted RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 SQSTM1Q13501 440 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 CD276Q5ZPR3 534 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 VASNQ6EMK4 673 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 TRMT10BQ6PF06 316 aaKnown RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 GPR155Q7Z3F1 870 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 TAX1BP1Q86VP1 789 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 PTRH1Q86Y79 214 aaKnown RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 ZC3H7AQ8IWR0 971 aaKnown RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 NLGN4XQ8N0W4 816 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 GIMAP8Q8ND71 665 aaPredicted RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 EDAQ92838 391 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 MAGEB10Q96LZ2 347 aaPredicted RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 LMF1Q96S06 567 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms