RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 TRMT10CQ7L0Y3 403 aaKnown RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 SLC44A5Q8NCS7 719 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 SLC17A8Q8NDX2 589 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 INTS2Q9H0H0 1204 aaKnown RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 PDHA1P08559 390 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 ACTN1P12814 892 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 TRIM42Q8IWZ5 723 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 TEX9Q8N6V9 391 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 SNF8Q96H20 258 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 CELF4Q9BZC1 486 aaKnown RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 PCIF1Q9H4Z3 704 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 Q9H521 79 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 MYBL2P10244 700 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 ICA1Q05084 483 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 JAMLQ86YT9 394 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 MDM1Q8TC05 714 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-219ENST00000481456 FAM81BQ96LP2 452 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 BCAP29Q9UHQ4 241 aa12.38□□□□□ -0.43
DDX39B-219ENST00000481456 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 SGK1O00141 431 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ZBTB5O15062 677 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 TCP10Q12799 353 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 CACNA1FO60840 1977 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 PITPNM2Q9BZ72 1349 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 SRRM3A6NNA2 597 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 PDHBP11177 359 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ESRRAP11474 423 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 TRPC3Q13507 836 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 TPCN2Q8NHX9 752 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ATXN2Q99700 1313 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 PJA2O43164 708 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 INHBAP08476 426 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 HARSP12081 509 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 CD302Q8IX05 232 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 RAB3IL1Q8TBN0 382 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 CEP95Q96GE4 821 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 TLR10Q9BXR5 811 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 NOL3O60936 208 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 FTLP02792 175 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 FAM153BP0C7A2 387 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ALCAMQ13740 583 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 CENPPQ6IPU0 288 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ZC3H18Q86VM9 953 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ZNF507Q8TCN5 953 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 NSMCE1Q8WV22 266 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 MTMR8Q96EF0 704 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 TTC25Q96NG3 672 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 DDX23Q9BUQ8 820 aaKnown RBP12.37□□□□□ -0.43
DDX39B-219ENST00000481456 FAM129AQ9BZQ8 928 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 FAM153AQ9UHL3 310 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 SERPINB13Q9UIV8 391 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
DDX39B-219ENST00000481456 A0A087X0T9 212 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 FAM228BP0C875 321 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 PPP1R2P3Q6NXS1 205 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 PPP4R1Q8TF05 950 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 SAYSD1Q9NPB0 183 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 MRPL11Q9Y3B7 192 aaKnown RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 RCN2Q14257 317 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 CENPUQ71F23 418 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms