RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 JAG1P78504 1218 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 MRPS9P82933 396 aaKnown RBP7.47□□□□□ -1.21
PBRM1-220ENST00000480064 DDX10Q13206 875 aaKnown RBP7.47□□□□□ -1.21
PBRM1-220ENST00000480064 SIM2Q14190 667 aaPredicted RBP7.47□□□□□ -1.21
PBRM1-220ENST00000480064 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
PBRM1-220ENST00000480064 ANO6Q4KMQ2 910 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 CCDC157Q569K6 752 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 CCDC62Q6P9F0 684 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 NPNTQ6UXI9 565 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 SLC41A1Q8IVJ1 513 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 KRT78Q8N1N4 520 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 TBATAQ96M53 351 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 ANO3Q9BYT9 981 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 GPR62Q9BZJ7 368 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 BHMT2Q9H2M3 363 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 ADAMTS6Q9UKP5 1117 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 TCFL5Q9UL49 500 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 SRPK3Q9UPE1 567 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 SNX13Q9Y5W8 968 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 SLC4A7Q9Y6M7 1214 aa7.47□□□□□ -1.21
PBRM1-220ENST00000480064 A0A0U1RQG5 324 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 CFAP69A5D8W1 941 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 LRRC10BA6NIK2 292 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 FAM155AB1AL88 458 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 DGKIO75912 1065 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 AGR2O95994 175 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 COL6A2P12110 1019 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 HSD3B1P14060 373 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 PTMSP20962 102 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 IL12RB1P42701 662 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 BCAR1P56945 870 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 ALDH6A1Q02252 535 aaKnown RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 TNK2Q07912 1038 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 TBX2Q13207 712 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 POLD3Q15054 466 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 EPHA7Q15375 998 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 PAN2Q504Q3 1202 aaKnown RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 RTP2Q5QGT7 225 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 CEP68Q76N32 757 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 MAATS1Q7Z4T9 603 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 KIAA0319LQ8IZA0 1049 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 CLASRPQ8N2M8 674 aaKnown RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 MYCT1Q8N699 235 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 GCC1Q96CN9 775 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 HEXIM2Q96MH2 286 aaKnown RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 ISCA1Q9BUE6 129 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 FOXP3Q9BZS1 431 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 KMT5AQ9NQR1 393 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 GPRC5BQ9NZH0 403 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 SERPINB13Q9UIV8 391 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 TUBD1Q9UJT1 453 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 PCDHGB3Q9Y5G1 929 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 ATP23Q9Y6H3 246 aa7.46□□□□□ -1.22
PBRM1-220ENST00000480064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-220ENST00000480064 C7orf72A4D263 438 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 EXOC5O00471 708 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 KRIT1O00522 736 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 MAN2B1O00754 1011 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 CLASP2O75122 1294 aaKnown RBP7.45□□□□□ -1.22
PBRM1-220ENST00000480064 ABCB4P21439 1286 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 TNFSF4P23510 183 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 PPM1AP35813 382 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 FNTBP49356 437 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 PRIM2P49643 509 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 CEBPAP49715 358 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-220ENST00000480064 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
PBRM1-220ENST00000480064 ICA1Q05084 483 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 BLMHQ13867 455 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 ANO4Q32M45 955 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 DGKKQ5KSL6 1271 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 FSTL4Q6MZW2 842 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 FAM214BQ7L5A3 538 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 OTOP3Q7RTS5 596 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 LINC00116Q8NCU8 138 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 COA7Q96BR5 231 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 EAF2Q96CJ1 260 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-220ENST00000480064 PLCD4Q9BRC7 762 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 DMRT3Q9NQL9 472 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 MARCH2Q9P0N8 246 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 DSEQ9UL01 958 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 L1RE1Q9UN81 338 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 CORO2BQ9UQ03 480 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 RABGAP1Q9Y3P9 1069 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 SNX11Q9Y5W9 270 aa7.45□□□□□ -1.22
PBRM1-220ENST00000480064 WTIPA6NIX2 430 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-220ENST00000480064 KPNA5O15131 536 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 TMEM253P0C7T8 217 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 ZNF865P0CJ78 1059 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-220ENST00000480064 FPR2P25090 351 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 LTKP29376 864 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 FXR1P51114 621 aaKnown RBP eCLIP7.44□□□□□ -1.22
PBRM1-220ENST00000480064 KCTD2Q14681 263 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 TUBB8Q3ZCM7 444 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 HYIQ5T013 277 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 TLDC1Q6P9B6 456 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 NLRP10Q86W26 655 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 PHYKPLQ8IUZ5 450 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms