RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 CCDC134Q9H6E4 229 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 ZWILCHQ9H900 591 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 INTS9Q9NV88 658 aaKnown RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 SERPINA10Q9UK55 444 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 PSMA7O14818 248 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 PALMO75781 387 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 BAG3O95817 575 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 FTCDO95954 541 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 ACADSP16219 412 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 CRKP46108 304 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 PLS1Q14651 629 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 DBN1Q16643 649 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 HHIPL2Q6UWX4 724 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 RAB3IPQ96QF0 476 aaPredicted RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 PUS7LQ9H0K6 701 aaKnown RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 RNPEPL1Q9HAU8 725 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 CTNNAL1Q9UBT7 734 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 PHF24Q9UPV7 400 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 DAGLAQ9Y4D2 1042 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 USP15Q9Y4E8 981 aaPredicted RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 GPAA1O43292 621 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 SHBGP04278 402 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 MTIF2P46199 727 aaKnown RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 PEX5P50542 639 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 PDE6CP51160 858 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 DHX9Q08211 1270 aaKnown RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 MYBPC3Q14896 1274 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 SLF2Q8IX21 1173 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 PRMT1Q99873 361 aaKnown RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
CHD6-208ENST00000480022 GAKO14976 1311 aa11.77□□□□□ -0.53
CHD6-208ENST00000480022 DOCK2Q92608 1830 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
CHD6-208ENST00000480022 SUN1O94901 812 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 STAT6P42226 847 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 EPS15P42566 896 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 LIFRP42702 1097 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 PSMC4P43686 418 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 OR52E8Q6IFG1 317 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 SYCP3Q8IZU3 236 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 CSGALNACT2Q8N6G5 542 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 LRRC4CQ9HCJ2 640 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 DMAP1Q9NPF5 467 aaPredicted RBP11.76□□□□□ -0.53
CHD6-208ENST00000480022 ZMYND8Q9ULU4 1186 aaPredicted RBP11.76□□□□□ -0.53
CHD6-208ENST00000480022 EGFRP00533 1210 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 OAS1P00973 400 aaKnown RBP11.76□□□□□ -0.53
CHD6-208ENST00000480022 LDHCP07864 332 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 GSTA2P09210 222 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 SLC1A4P43007 532 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
CHD6-208ENST00000480022 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 TTI2Q6NXR4 508 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
CHD6-208ENST00000480022 TAF4BQ92750 862 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 OPTNQ96CV9 577 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 ZDHHC15Q96MV8 337 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 ADAM7Q9H2U9 754 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 MYOZ2Q9NPC6 264 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 MYH2Q9UKX2 1941 aa11.76□□□□□ -0.53
CHD6-208ENST00000480022 MYH6P13533 1939 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 MARCH6O60337 910 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 EHHADHQ08426 723 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 RTN1Q16799 776 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 STK32AQ8WU08 396 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 TRIM7Q9C029 511 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 ATXN10Q9UBB4 475 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 SCOCQ9UIL1 159 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 BTDP43251 543 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 DYNLL1P63167 89 aaKnown RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 ZNF174Q15697 407 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 SESTD1Q86VW0 696 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 DNAJC9Q8WXX5 260 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 RIOK1Q9BRS2 568 aaKnown RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
CHD6-208ENST00000480022 TRIM33Q9UPN9 1127 aa11.75□□□□□ -0.53
CHD6-208ENST00000480022 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms