RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 LIG3P49916 1009 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 EP400NLQ6ZTU2 488 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 SAMD3Q8N6K7 520 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 CAMKK2Q96RR4 588 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 PSMB7Q99436 277 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 LXNQ9BS40 222 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 DMAC2Q9NW81 257 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 NAGPAQ9UK23 515 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 ZBTB12Q9Y330 459 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 RPTORQ8N122 1335 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 ZC3H4Q9UPT8 1303 aaKnown RBP20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 ZMYND10O75800 440 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 STAT1P42224 750 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 ALCAMQ13740 583 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 ODR4Q5SWX8 454 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 C8orf74Q6P047 294 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 MIGA2Q7L4E1 593 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 TAF4BQ92750 862 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 ZBED3Q96IU2 234 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 FIZ1Q96SL8 496 aa20.84■□□□□ 0.93
TNFRSF8-204ENST00000479933 PHACTR2O75167 634 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 GHRHRQ02643 423 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 ZC2HC1CQ53FD0 456 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 ALKBH5Q6P6C2 394 aaKnown RBP20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 SLC9A9Q8IVB4 645 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 LMBR1Q8WVP7 490 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 LPAR1Q92633 364 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 FBXO28Q9NVF7 368 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 MAP3K20Q9NYL2 800 aaKnown RBP20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 PGAP2Q9UHJ9 254 aa20.83■□□□□ 0.93
TNFRSF8-204ENST00000479933 COL4A5P29400 1685 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 WDR46O15213 610 aaKnown RBP20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 MAPTP10636 758 aaKnown RBP20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 MATR3P43243 847 aaKnown RBP eCLIP20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 EPHB4P54760 987 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 EZH2Q15910 746 aaKnown RBP20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 EMBQ6PCB8 327 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 RBM46Q8TBY0 533 aaKnown RBP20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 CABS1Q96KC9 395 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 PACSIN1Q9BY11 444 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 PLEKHA4Q9H4M7 779 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 BCAS3Q9H6U6 928 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 POLD4Q9HCU8 107 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 AGPAT3Q9NRZ7 376 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 GINM1Q9NU53 330 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 PNMA2Q9UL42 364 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 NENFQ9UMX5 172 aa20.83■□□□□ 0.92
TNFRSF8-204ENST00000479933 A0A0A6YYK5 440 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 ZBTB39O15060 712 aa20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 FTCDO95954 541 aa20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 INPP5BP32019 993 aa20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 FMO5P49326 533 aa20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 MIER3Q7Z3K6 550 aa20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 SPATS2Q86XZ4 545 aaKnown RBP20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 RBM12Q9NTZ6 932 aaKnown RBP20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 DMGDHQ9UI17 866 aaKnown RBP20.82■□□□□ 0.92
TNFRSF8-204ENST00000479933 PPP1R12AO14974 1030 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 P4HBP07237 508 aaKnown RBP20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 MYBL2P10244 700 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 POLD1P28340 1107 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 RPS6KA1Q15418 735 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 SLC30A10Q6XR72 485 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 PBKQ96KB5 322 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 STRA6Q9BX79 667 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 STK33Q9BYT3 514 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 WRAP73Q9P2S5 460 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 KCNG1Q9UIX4 513 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 DBR1Q9UK59 544 aaKnown RBP20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 CLSTN1O94985 981 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 H2AFZP0C0S5 128 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 NNTQ13423 1086 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 NEDD9Q14511 834 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 H2AFVQ71UI9 128 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 IFT20Q8IY31 132 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 AGBL1Q96MI9 1066 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 ZNF341Q9BYN7 854 aa20.81■□□□□ 0.92
TNFRSF8-204ENST00000479933 ZNF536O15090 1300 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 A6NNZ2 444 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 TMCO5BA8MYB1 307 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 KIF3CO14782 793 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 HIP1RO75146 1068 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 PPP1R37O75864 691 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 FSBPO95073 299 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 ITGB5P18084 799 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 RFX1P22670 979 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 TUBB8Q3ZCM7 444 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 SYCP3Q8IZU3 236 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 TMEM174Q8WUU8 243 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 INPP4AQ96PE3 977 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 GLIS2Q9BZE0 524 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 KCNH7Q9NS40 1196 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 LARSQ9P2J5 1176 aaKnown RBP20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 LMNB1P20700 586 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 SOX5P35711 763 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 CCT5P48643 541 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 IRAK1P51617 712 aa20.8■□□□□ 0.92
TNFRSF8-204ENST00000479933 NPEPPSP55786 919 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms