RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
SP140-210ENST00000479539 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
SP140-210ENST00000479539 ZBTB39O15060 712 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 SPATA31C1P0DKV0 1188 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
SP140-210ENST00000479539 RFC5P40937 340 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 SARSP49591 514 aaKnown RBP11.78□□□□□ -0.52
SP140-210ENST00000479539 TOB1P50616 345 aaPredicted RBP11.78□□□□□ -0.52
SP140-210ENST00000479539 NUBP1P53384 320 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 GRB10Q13322 594 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 CUL4AQ13619 759 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 SLC24A5Q71RS6 500 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 SLC7A3Q8WY07 619 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 SAMD11Q96NU1 681 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 ADAM2Q99965 735 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 LMCD1Q9NZU5 365 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 NOL7Q9UMY1 257 aaKnown RBP11.78□□□□□ -0.52
SP140-210ENST00000479539 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.78□□□□□ -0.52
SP140-210ENST00000479539 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 CHD7Q9P2D1 2997 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 MYO9BQ13459 2157 aa11.78□□□□□ -0.52
SP140-210ENST00000479539 A0A087WZ62 844 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 POTEMA6NI47 508 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 C9IYK1 514 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 LINC00271P0C7V0 271 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 POLGP54098 1239 aaPredicted RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 NBR1Q14596 966 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 XKR9Q5GH70 373 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 CATSPER3Q86XQ3 398 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 FIBCD1Q8N539 461 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 FDXACB1Q9BRP7 624 aaPredicted RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 POLR3CQ9BUI4 534 aaPredicted RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 GCOM2Q9BZD3 368 aaPredicted RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 TUFT1Q9NNX1 390 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 ANKEF1Q9NU02 776 aa11.77□□□□□ -0.53
SP140-210ENST00000479539 SPTBN5Q9NRC6 3674 aaKnown RBP11.77□□□□□ -0.53
SP140-210ENST00000479539 DENND3A2RUS2 1198 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 H3BQV1 296 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
SP140-210ENST00000479539 TECP42680 631 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 PDIA5Q14554 519 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 EPC2Q52LR7 807 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 KSR1Q8IVT5 923 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
SP140-210ENST00000479539 TMEM192Q8IY95 271 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 CMTR2Q8IYT2 770 aaKnown RBP11.76□□□□□ -0.53
SP140-210ENST00000479539 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 PRPF31Q8WWY3 499 aaKnown RBP11.76□□□□□ -0.53
SP140-210ENST00000479539 INO80BQ9C086 356 aaPredicted RBP11.76□□□□□ -0.53
SP140-210ENST00000479539 ELAC1Q9H777 363 aaKnown RBP11.76□□□□□ -0.53
SP140-210ENST00000479539 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
SP140-210ENST00000479539 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 MTUS1Q9ULD2 1270 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 PCDHB7Q9Y5E2 793 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 PCDHB6Q9Y5E3 794 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 A0A0C4DFX4 3053 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 ADGRA3Q8IWK6 1321 aa11.76□□□□□ -0.53
SP140-210ENST00000479539 C5orf67F2Z3F1 127 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 H3BNC9 293 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 ASAP2O43150 1006 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 MED24O75448 989 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 CSDE1O75534 798 aaKnown RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 DGAT1O75907 488 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 RB1P06400 928 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 ZSCAN20P17040 1043 aaPredicted RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 MUTP22033 750 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 FGFR4P22455 802 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 RPA1P27694 616 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 BMPR1AP36894 532 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 RARRES1P49788 294 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 LAMTOR4Q0VGL1 99 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 PTGDRQ13258 359 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 BTG3Q14201 252 aaPredicted RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 EMC2Q15006 297 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 CCDC85BQ15834 202 aaPredicted RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 RILPL1Q5EBL4 403 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 MCTP1Q6DN14 999 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 ERMNQ8TAM6 284 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 PIGOQ8TEQ8 1089 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 TCP11Q8WWU5 503 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 PSPC1Q8WXF1 523 aaKnown RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 PPM1EQ8WY54 764 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 TMEM143Q96AN5 459 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 SCLT1Q96NL6 688 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 NACC1Q96RE7 527 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms