RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MMP1P03956 469 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 FDPSP14324 419 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 SFNP31947 248 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 RBM10P98175 930 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 B3GNT9Q6UX72 402 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 KSR1Q8IVT5 923 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 ZNF579Q8NAF0 562 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 NLRP7Q8WX94 980 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 RNF19AQ9NV58 838 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 TYW1Q9NV66 732 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 GRXCR2A6NFK2 248 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 CCNT1O60563 726 aaKnown RBP19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 JAK2O60674 1132 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 SSTR3P32745 418 aaPredicted RBP19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 NPEPPSP55786 919 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 TARBP2Q15633 366 aaKnown RBP19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 SLC24A5Q71RS6 500 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 FAM178BQ8IXR5 827 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 CEP89Q96ST8 783 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 C22orf23Q9BZE7 217 aa19.56■□□□□ 0.72
ECHDC1-216ENST00000479525 STK36Q9NRP7 1315 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 WNT7AO00755 349 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 CDKL5O76039 1030 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 TMOD1P28289 359 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 NEK8Q86SG6 692 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 LMAN2LQ9H0V9 348 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 ATP6V0A4Q9HBG4 840 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 C1orf112Q9NSG2 853 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 VAV3Q9UKW4 847 aa19.55■□□□□ 0.72
ECHDC1-216ENST00000479525 A0A087WZ62 844 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 PER2O15055 1255 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 ZBTB39O15060 712 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 EIF4BP23588 611 aaKnown RBP19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 NRIP1P48552 1158 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 ST3GAL1Q11201 340 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 NCAPH2Q6IBW4 605 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 LRRC55Q6ZSA7 311 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 ANO5Q75V66 913 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 RHPN2Q8IUC4 686 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 COLGALT1Q8NBJ5 622 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 HAS1Q92839 578 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 FDXACB1Q9BRP7 624 aaPredicted RBP19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 PLVAPQ9BX97 442 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 CWH43Q9H720 699 aa19.54■□□□□ 0.72
ECHDC1-216ENST00000479525 DARSP14868 501 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 XKR3Q5GH77 459 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 GALNT17Q6IS24 598 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 ECHDC2Q86YB7 292 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 THNSL1Q8IYQ7 743 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 P2RX5Q93086 422 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 NLRP4Q96MN2 994 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 CASD1Q96PB1 797 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 KCNMB3Q9NPA1 279 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 TMEM161AQ9NX61 479 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 RGL1Q9NZL6 768 aa19.53■□□□□ 0.72
ECHDC1-216ENST00000479525 MARCH6O60337 910 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 ZSCAN20P17040 1043 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 NDUFV1P49821 464 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 NEK4P51957 841 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 ERVFC1P60507 584 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 GUCY1B3Q02153 619 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 CYP4A11Q02928 519 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 CTC1Q2NKJ3 1217 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 CLLU1OSQ5K130 101 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 ODR4Q5SWX8 454 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 PLPP4Q5VZY2 271 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 MOXD1Q6UVY6 613 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 NSUN7Q8NE18 718 aaKnown RBP19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 RDM1Q8NG50 284 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 HELQQ8TDG4 1101 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 MICAL1Q8TDZ2 1067 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 LPPQ93052 612 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 GTF3C6Q969F1 213 aa19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 NIFKQ9BYG3 293 aaKnown RBP19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 SUCLA2Q9P2R7 463 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 BARX2Q9UMQ3 279 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-216ENST00000479525 A0A087WWV3 80 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 MEIS3P2A8K0S8 358 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 FGF18O76093 207 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 ATF7P17544 494 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 KRT2P35908 639 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 ANAPC15P60006 121 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 PSMC5P62195 406 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 FAM189BP81408 668 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 COL19A1Q14993 1142 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 GJD3Q8N144 294 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 DYDC2Q96IM9 177 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 PCDHB12Q9Y5F1 795 aa19.51■□□□□ 0.71
ECHDC1-216ENST00000479525 NT5C1B-RDH14C9J2C7 533 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 MBTPS2O43462 519 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 GLP2RO95838 553 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 XBP1P17861 261 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 PPP2R5CQ13362 524 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 TMEM143Q96AN5 459 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 C11orf16Q9NQ32 467 aa19.5■□□□□ 0.71
ECHDC1-216ENST00000479525 IGKV6-21A0A0C4DH24 114 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 BTBD18B2RXH4 712 aa19.49■□□□□ 0.71
ECHDC1-216ENST00000479525 ATP2B1P20020 1258 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms